BLASTX nr result

ID: Angelica22_contig00016971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016971
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21428.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...   127   9e-28
ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...   126   2e-27
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...   125   3e-27
emb|CAD12248.1| DCL protein [Coffea arabica]                          124   1e-26

>emb|CBI21428.3| unnamed protein product [Vitis vinifera]
          Length = 103

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/64 (85%), Positives = 61/64 (95%)
 Frame = -3

Query: 373 SGVDYITIGYHPDFESSRCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQ 194
           SG+DYIT+GYHP+FESSRCLFIV+KDG+LVDFSYWKC+KG IRKNYPLYAD FILRHFRQ
Sbjct: 39  SGIDYITVGYHPEFESSRCLFIVRKDGELVDFSYWKCIKGFIRKNYPLYADSFILRHFRQ 98

Query: 193 RRRS 182
            RRS
Sbjct: 99  HRRS 102


>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/64 (85%), Positives = 61/64 (95%)
 Frame = -3

Query: 373 SGVDYITIGYHPDFESSRCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQ 194
           SG+DYIT+GYHP+FESSRCLFIV+KDG+LVDFSYWKC+KG IRKNYPLYAD FILRHFRQ
Sbjct: 141 SGIDYITVGYHPEFESSRCLFIVRKDGELVDFSYWKCIKGFIRKNYPLYADSFILRHFRQ 200

Query: 193 RRRS 182
            RRS
Sbjct: 201 HRRS 204


>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  126 bits (317), Expect = 2e-27
 Identities = 54/64 (84%), Positives = 63/64 (98%)
 Frame = -3

Query: 370 GVDYITIGYHPDFESSRCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQR 191
           GVDYIT+GYHPDFESSRCLFIV+KDG++VDFSYWKC+KGLIRKNYPLYA+ FILRHFR+R
Sbjct: 160 GVDYITVGYHPDFESSRCLFIVRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRR 219

Query: 190 RRSN 179
           RR++
Sbjct: 220 RRNS 223


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/64 (84%), Positives = 62/64 (96%)
 Frame = -3

Query: 370 GVDYITIGYHPDFESSRCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQR 191
           GVDYIT+GYHPDFE+SRCLFIV+KDG+ VDFSYWKC+KGLIRKNYPLYAD FILRHFR+R
Sbjct: 161 GVDYITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKR 220

Query: 190 RRSN 179
           RR++
Sbjct: 221 RRND 224


>emb|CAD12248.1| DCL protein [Coffea arabica]
          Length = 224

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/65 (83%), Positives = 62/65 (95%)
 Frame = -3

Query: 373 SGVDYITIGYHPDFESSRCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQ 194
           SGVDYITIGYHPDF+ SRCLFIV+KDG+LVDFSYWKC+KGLIRKNYPLYAD FI+RHF++
Sbjct: 160 SGVDYITIGYHPDFDRSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADTFIIRHFKK 219

Query: 193 RRRSN 179
            RRS+
Sbjct: 220 PRRSD 224


Top