BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016646
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi...   343   4e-92
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi...   329   7e-88
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,...   323   4e-86
ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|2...   316   8e-84
ref|NP_567622.1| pentatricopeptide repeat-containing protein [Ar...   306   6e-81

>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
           [Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
           protein product [Vitis vinifera]
          Length = 295

 Score =  343 bits (881), Expect = 4e-92
 Identities = 177/291 (60%), Positives = 213/291 (73%), Gaps = 7/291 (2%)
 Frame = +3

Query: 114 MLSLRFCPAVFAKRLESVQFWRRNSSPVVVCAAKGPRQRYPRVWKTKTRIGTISKSKKLV 293
           ML LR+ PA   +RL++V+   +N   +VVC AKGPR RYPRVWKT+ RIGTISKS KLV
Sbjct: 1   MLCLRYSPATITRRLDAVEI-PKNPRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLV 59

Query: 294 DTIKELSNVKEEVYGALDSFIAWELEFPLITVKKALKALENENEWKRIIQVTKWMLSKGQ 473
           D IK LSNVKEEVYGALDSFIAWELEFPLITVKKALK LE++ EWKRIIQVTKWMLSKGQ
Sbjct: 60  DCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKGQ 119

Query: 474 GRTMGSYYMLLNALAEDGRLEEAEELWTKLFTENLESMPRNFFDKMISIYYKREMYDKLF 653
           GRTMGSY+ LLNALAEDGRL+EAEELWTKLF+ENLES+PR F+DKMISIYY+R+M++K+F
Sbjct: 120 GRTMGSYFTLLNALAEDGRLDEAEELWTKLFSENLESLPRVFYDKMISIYYRRDMHEKMF 179

Query: 654 EVFADMDELGVKPTVSVVGMVGDVFQKLNMLDXXXXXXXXXXXXXXXXXXIQGKRVKIRS 833
           E+FADM+ELG++P  S+V MVGDVFQKL MLD                  I+GKRV+IR+
Sbjct: 180 EIFADMEELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYPPPKWEYRYIKGKRVRIRA 239

Query: 834 K-------PIDRSRYVRNPVIKADEETLETLPESCESTDVSLNKPSDNLYE 965
           K       P +         +    +  E   E  +  D S++   + +YE
Sbjct: 240 KLTGESDDPGEAESDDPGEAVNEINDKTENSNEMHDEADSSVDDADEPIYE 290


>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Cucumis sativus]
          Length = 331

 Score =  329 bits (844), Expect = 7e-88
 Identities = 178/286 (62%), Positives = 213/286 (74%), Gaps = 5/286 (1%)
 Frame = +3

Query: 111 RMLSLRFCPAVFAKRLESVQF-WRRNSSPVVVCAAKGPRQRYPRVWKTKTRIGTISKSKK 287
           RML+L +   V +KR+ESV F W  +SS  VVCAAKGPR RYPRVWKTK RIGTISK+ K
Sbjct: 18  RMLTLVYTFPVTSKRIESVNFSWCPSSS--VVCAAKGPRPRYPRVWKTKKRIGTISKAAK 75

Query: 288 LVDTIKELSNVKEEVYGALDSFIAWELEFPLITVKKALKALENENEWKRIIQVTKWMLSK 467
           LVD +K LSNVKEEVYGALDSFIAWELEFPLITVKKALK LEN+ EWKRIIQ+TKWMLSK
Sbjct: 76  LVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSK 135

Query: 468 GQGRTMGSYYMLLNALAEDGRLEEAEELWTKLFTENLESMPRNFFDKMISIYYKREMYDK 647
           GQGRTMGSY+ LLNALAEDGRL+EAEELW KLF+++LES+PR FF KMIS+YY + M+DK
Sbjct: 136 GQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDK 195

Query: 648 LFEVFADMDELGVKPTVSVVGMVGDVFQKLNMLDXXXXXXXXXXXXXXXXXXIQGKRVKI 827
           LFEVFADM+ELGV+P +++V  VG+VFQ+L MLD                  I+GKRVKI
Sbjct: 196 LFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKI 255

Query: 828 RSKPIDRSRYVRNPV---IKADEETLETLPES-CESTDVSLNKPSD 953
           R+K +  +    N +    K +  +  ++ E+   S D SL    D
Sbjct: 256 RAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSEDSSLEDDED 301


>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  323 bits (829), Expect = 4e-86
 Identities = 176/301 (58%), Positives = 214/301 (71%)
 Frame = +3

Query: 105  YRRMLSLRFCPAVFAKRLESVQFWRRNSSPVVVCAAKGPRQRYPRVWKTKTRIGTISKSK 284
            +R+ML LR    + + R E ++F +  SS  VV A KG R R PRVWKTK RIGTISKS 
Sbjct: 32   WRQMLCLRPPLPLISTRFEVIKFSKSTSS--VVSALKGARPRAPRVWKTKPRIGTISKSA 89

Query: 285  KLVDTIKELSNVKEEVYGALDSFIAWELEFPLITVKKALKALENENEWKRIIQVTKWMLS 464
            KLV+ IK LSNVKEEVYGALDS IAWELEFPLI VKKALK LENE EWKRIIQV KWMLS
Sbjct: 90   KLVECIKGLSNVKEEVYGALDSLIAWELEFPLIAVKKALKTLENEQEWKRIIQVIKWMLS 149

Query: 465  KGQGRTMGSYYMLLNALAEDGRLEEAEELWTKLFTENLESMPRNFFDKMISIYYKREMYD 644
            KGQGRTMG+Y+ LLNALAED RL+EAEELWTKLF++NLE  PRNFFDKMISIYYKREM++
Sbjct: 150  KGQGRTMGTYFTLLNALAEDERLDEAEELWTKLFSDNLEGTPRNFFDKMISIYYKREMHE 209

Query: 645  KLFEVFADMDELGVKPTVSVVGMVGDVFQKLNMLDXXXXXXXXXXXXXXXXXXIQGKRVK 824
            K+FE+FADM+ELGV+P+VS+V M+G VFQKL MLD                  I+GKRV+
Sbjct: 210  KMFEIFADMEELGVRPSVSIVNMMGSVFQKLGMLDKYRKLKKKYPPPKWEYRYIKGKRVR 269

Query: 825  IRSKPIDRSRYVRNPVIKADEETLETLPESCESTDVSLNKPSDNLYEHGVAESSTVKHSE 1004
            +R+K ++      N  +  + ET     +  E  +  LN+ +     + + E S+ K SE
Sbjct: 270  LRAKQVNEF-LGANESVNQNAETPYISNKLNEEDNTKLNEANVEEDLNELDEESSTKSSE 328

Query: 1005 S 1007
            +
Sbjct: 329  A 329


>ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|222836055|gb|EEE74476.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  316 bits (809), Expect = 8e-84
 Identities = 157/230 (68%), Positives = 185/230 (80%)
 Frame = +3

Query: 201 VCAAKGPRQRYPRVWKTKTRIGTISKSKKLVDTIKELSNVKEEVYGALDSFIAWELEFPL 380
           VCAAKGPR RYPRVWKTK RIGTISKS KLVD IK LSNVKEEVYGALDSF+AWELEFPL
Sbjct: 1   VCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPL 60

Query: 381 ITVKKALKALENENEWKRIIQVTKWMLSKGQGRTMGSYYMLLNALAEDGRLEEAEELWTK 560
           I VKKAL+ALE + EWKRIIQVTKWMLSKGQGRTMG+Y+ L+NALAEDGRL+E EELWTK
Sbjct: 61  IAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTK 120

Query: 561 LFTENLESMPRNFFDKMISIYYKREMYDKLFEVFADMDELGVKPTVSVVGMVGDVFQKLN 740
           LF++ LE  PR  FDKMISIYYKR+M+D++FE+FADM+ELG++P+VS+V MVG+VFQ+L 
Sbjct: 121 LFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLG 180

Query: 741 MLDXXXXXXXXXXXXXXXXXXIQGKRVKIRSKPIDRSRYVRNPVIKADEE 890
           M+D                  I+GKRV++R+K  + +  V N V   DEE
Sbjct: 181 MMDKYEKLKKKYPPPKWIYRYIKGKRVRVRAKNDNEAGDV-NSVASGDEE 229


>ref|NP_567622.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75246109|sp|Q8LG95.1|PP332_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g21190; AltName: Full=Protein EMBRYO DEFECTIVE 1417
            gi|21618230|gb|AAM67280.1| unknown [Arabidopsis thaliana]
            gi|51969238|dbj|BAD43311.1| putative protein [Arabidopsis
            thaliana] gi|51971351|dbj|BAD44340.1| putative protein
            [Arabidopsis thaliana] gi|51971365|dbj|BAD44347.1|
            putative protein [Arabidopsis thaliana]
            gi|332659017|gb|AEE84417.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 307

 Score =  306 bits (784), Expect = 6e-81
 Identities = 165/303 (54%), Positives = 208/303 (68%), Gaps = 3/303 (0%)
 Frame = +3

Query: 114  MLSLRFCPA--VFAKRLESVQFWRRNSSPVVVCAAKGPRQRYPRVWKTKTRIGTISKSKK 287
            MLSLR+     +   R  S + + +  + VVVCAA+GPR R PRVWKT+ RIGTISK+ K
Sbjct: 1    MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60

Query: 288  LVDTIKELSNVKEEVYGALDSFIAWELEFPLITVKKALKALENENEWKRIIQVTKWMLSK 467
            ++  IK LSNVKEEVYGALDSFIAWELEFPL+ VKKAL  LE+E EWK+IIQVTKWMLSK
Sbjct: 61   MIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSK 120

Query: 468  GQGRTMGSYYMLLNALAEDGRLEEAEELWTKLFTENLESMPRNFFDKMISIYYKREMYDK 647
            GQGRTMG+Y+ LLNALAED RL+EAEELW KLF E+LE  PR FF+KMISIYYKR+M+ K
Sbjct: 121  GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQK 180

Query: 648  LFEVFADMDELGVKPTVSVVGMVGDVFQKLNMLDXXXXXXXXXXXXXXXXXXIQGKRVKI 827
            LFEVFADM+ELGVKP V++V MVG VF KL M D                  I+G+RVK+
Sbjct: 181  LFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKV 240

Query: 828  RSKPIDRSRYVRNPVIKADEETLETLPESCESTDVSLNKPSDNLYE-HGVAESSTVKHSE 1004
            ++K ++         + +DE+ ++   ES E     L++  ++  E  G ++        
Sbjct: 241  KAKQLNELSEGEGG-LSSDEDKIDNEIESEEEDGEDLSEEEEDEKELLGGSQGQITSREP 299

Query: 1005 SID 1013
            S+D
Sbjct: 300  SLD 302