BLASTX nr result

ID: Angelica22_contig00016595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016595
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...    64   3e-08
ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...    64   4e-08
ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778...    57   5e-06
ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|2...    56   9e-06

>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Cucumis sativus]
           gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like [Cucumis
           sativus]
          Length = 662

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +2

Query: 341 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASVFISLL 475
           + ++VFD VN+EAFNPS+G+NVTG  ENYL+L+  QG SVFISL+
Sbjct: 288 FSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLV 332


>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
           gi|147821405|emb|CAN63500.1| hypothetical protein
           VITISV_011675 [Vitis vinifera]
           gi|297738929|emb|CBI28174.3| unnamed protein product
           [Vitis vinifera]
          Length = 660

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +2

Query: 341 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASVFISLL 475
           + ++VFD VNREAFN S GVNVTG  ENYL+LN  QGASVF+SL+
Sbjct: 286 FDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASVFMSLV 330


>ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778422 [Glycine max]
          Length = 660

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%)
 Frame = +2

Query: 341 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASVFISLLLHKQ 487
           + ++VFD VNREAFN   GV+VTG  ENYL+L+  QG SV+++L+ + Q
Sbjct: 291 FNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSLGQGTSVYLTLVSNSQ 339


>ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|222838847|gb|EEE77198.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 32/70 (45%), Positives = 42/70 (60%)
 Frame = +2

Query: 284 LLCKRVHW*KCGY*RSRRGYKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASVF 463
           LL ++VH         R  + ++VFD VNR A N S G+NVTG  ENYL+L    G S+F
Sbjct: 285 LLLRKVH---------RTIFDEQVFDMVNRGAVNQSSGLNVTGIQENYLQLCIGPGISIF 335

Query: 464 ISLLLHKQGD 493
           IS++   QGD
Sbjct: 336 ISIVPSDQGD 345


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