BLASTX nr result

ID: Angelica22_contig00016510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016510
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus tr...   146   2e-33
ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp....   127   1e-27
gb|AFK34406.1| unknown [Lotus japonicus]                              126   2e-27
pir||T08999 hypothetical protein - spinach chloroplast                126   2e-27
ref|XP_003557519.1| PREDICTED: photosystem II reaction center pr...   122   6e-26

>ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus trichocarpa]
           gi|133712057|gb|ABO36700.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 113

 Score =  146 bits (369), Expect = 2e-33
 Identities = 82/113 (72%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = -3

Query: 516 LTTAKNSG-GSFQFWI*NE*VQEIRELRIPTRKTNPIHNDVPENKTFLLLDQPSGEANTT 340
           L T KN G G F F I    VQE+RELRIPTRKTNPIHNDVPEN TFLLLDQPSGE  TT
Sbjct: 3   LATLKNWGRGLFHFCIW---VQEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEKTT 59

Query: 339 GTPITKINEVAINAKTANWKARVMLLILQAINK*TIPFNP*KNCTKIHHRGIL 181
           GT I KI+EVAINAKTANWKA VM LILQA NK TIPF+P     K HH GI+
Sbjct: 60  GTLINKIDEVAINAKTANWKAIVMFLILQATNKRTIPFDPSIRQKKTHHGGII 112


>ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334191|gb|EFH64609.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 76

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +2

Query: 242 LLIAWRIKSMTLAFQLAVFALIATSLILVIGVPVVFASPDGWSSNKNVLFSGTSLWIGLV 421
           LLIAWRIK+MT+AFQLAVFALI TS IL+I VPVVFASPDGWSSNKNV+FSGTSLWIGLV
Sbjct: 6   LLIAWRIKNMTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLV 65

Query: 422 FLVGILNSLIS 454
           FLVGILNSLIS
Sbjct: 66  FLVGILNSLIS 76


>gb|AFK34406.1| unknown [Lotus japonicus]
          Length = 80

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/77 (81%), Positives = 67/77 (87%)
 Frame = -3

Query: 450 IRELRIPTRKTNPIHNDVPENKTFLLLDQPSGEANTTGTPITKINEVAINAKTANWKARV 271
           +RELRIPTR TN IHNDVPEN TFLLLDQPSGEANTTGT I K+NEVAINAKTANWKA V
Sbjct: 1   MRELRIPTRNTNAIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 60

Query: 270 MLLILQAINK*TIPFNP 220
           + LILQ  NK TIPF+P
Sbjct: 61  IFLILQITNKRTIPFDP 77


>pir||T08999 hypothetical protein - spinach chloroplast
          Length = 90

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/77 (81%), Positives = 69/77 (89%)
 Frame = -3

Query: 450 IRELRIPTRKTNPIHNDVPENKTFLLLDQPSGEANTTGTPITKINEVAINAKTANWKARV 271
           +RELRIPTRKTNP HNDVPEN  FLLLDQPSGEANTTGT I+KI+EVAINAKTANWKA V
Sbjct: 1   MRELRIPTRKTNPSHNDVPENTIFLLLDQPSGEANTTGTLISKIDEVAINAKTANWKAIV 60

Query: 270 MLLILQAINK*TIPFNP 220
           + +ILQAI K TIPF+P
Sbjct: 61  IRIILQAIKKQTIPFDP 77


>ref|XP_003557519.1| PREDICTED: photosystem II reaction center protein Z-like
           [Brachypodium distachyon]
          Length = 70

 Score =  122 bits (305), Expect = 6e-26
 Identities = 59/70 (84%), Positives = 67/70 (95%)
 Frame = +2

Query: 245 LIAWRIKSMTLAFQLAVFALIATSLILVIGVPVVFASPDGWSSNKNVLFSGTSLWIGLVF 424
           +IAWRI++MT+AFQLAVFALIATS +LVI VP+VFASPDGWS+NKNV+FSGTSLWIGLVF
Sbjct: 1   MIAWRIRNMTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 60

Query: 425 LVGILNSLIS 454
           LV ILNSLIS
Sbjct: 61  LVAILNSLIS 70


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