BLASTX nr result

ID: Angelica22_contig00016416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016416
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI50287.1| plastid RNA-binding protein 1 [Nicotiana benthami...   226   2e-56
ref|XP_004165469.1| PREDICTED: uncharacterized LOC101220703 [Cuc...   222   2e-55
ref|XP_004147935.1| PREDICTED: uncharacterized protein LOC101220...   219   2e-54
ref|XP_002323529.1| predicted protein [Populus trichocarpa] gi|2...   214   6e-53
ref|XP_002309092.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51

>gb|ADI50287.1| plastid RNA-binding protein 1 [Nicotiana benthamiana]
          Length = 326

 Score =  226 bits (575), Expect = 2e-56
 Identities = 142/323 (43%), Positives = 180/323 (55%), Gaps = 20/323 (6%)
 Frame = -1

Query: 1297 SISSSTYLSGQTLLTLIPKFXXXXXXXXXXXXXL-----IRMGGGPRTFPGGVNKWQWKR 1133
            S+SSS  +SG + L L  KF                   IRMGGGPRT+PGGV+KWQWKR
Sbjct: 15   SLSSSKTISGASQLFLSTKFCTLNLSTTTITNIPYKSSTIRMGGGPRTYPGGVSKWQWKR 74

Query: 1132 MXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASADEQVQV 953
            M                 QIYEMRKRAELKAAVSELERPWEVVEKAP LFS SADEQ+ V
Sbjct: 75   MQAKKAKQLLKARLARERQIYEMRKRAELKAAVSELERPWEVVEKAPTLFSVSADEQLSV 134

Query: 952  LADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGVVHSIRPYGRVNDEIDVKIGSF 773
            LADRFQKPGGFD+WS+KDGPELFK  DG PSARFFPKGVVHSI+PYG++ + +    G  
Sbjct: 135  LADRFQKPGGFDMWSDKDGPELFKPEDGLPSARFFPKGVVHSIKPYGKIENAVG---GFE 191

Query: 772  DRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLNEGRSGEGSKGKVRKKRH------GRSLR 611
            D  N                 + +     +L  G   EG +G +  + +      G   +
Sbjct: 192  DSSNFGSDSQSESDRKVRMKSNRHERNSRILRTGSDREGKEGYLDMEDNNKVSIDGNDRK 251

Query: 610  GLNSNDG-GSNGRGM-----RLREVEGGNSGVRDMSWRDTNNGLDSRRVGLDRENSGRSR 449
            G+ +  G  +N R M     +   VE G S +++ S R  ++         D E+ GR  
Sbjct: 252  GMQNKFGKNANRRKMFGHPDKFSSVETGMSRIKNKSQRPADH---------DGEH-GRFN 301

Query: 448  VV---KSANSEVYDMDLQRDGNY 389
            VV     ++S V++++LQ DG+Y
Sbjct: 302  VVDKFDDSDSPVFELNLQDDGSY 324


>ref|XP_004165469.1| PREDICTED: uncharacterized LOC101220703 [Cucumis sativus]
          Length = 336

 Score =  222 bits (566), Expect = 2e-55
 Identities = 145/343 (42%), Positives = 189/343 (55%), Gaps = 26/343 (7%)
 Frame = -1

Query: 1330 MSLPLQPPKNLSISSSTYLSGQTLLTLIPKFXXXXXXXXXXXXXLIRMGGGPRTFPGGVN 1151
            +S+P +PP     S S  L+G   L+ +P               LIRMGGGPRT+PGGV+
Sbjct: 10   ISIPSRPPL---FSFSQSLTGANHLSYLPN----RMPILTKTTPLIRMGGGPRTYPGGVS 62

Query: 1150 KWQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASA 971
            KWQWKRM                 QIYEMRKRAELKAAVS+LERPWEVVEKAP LFS  A
Sbjct: 63   KWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSVGA 122

Query: 970  DEQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGVVHSIRPYGRVND--- 800
            DEQV+VLADRFQ+PGGFDLW+E+DGP+LF+TVD  PSARFFPKGVVHS+RPY  +     
Sbjct: 123  DEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGSES 182

Query: 799  --EIDVKIG-----SFDRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLN-EG--------- 671
               +D + G     +F   N               S D+  +  N  + EG         
Sbjct: 183  SLSLDSEAGNEIPTTFQEDNFRTHRRSSNQTLRSFSVDKGEDNTNYSDTEGSYPRHSSAP 242

Query: 670  RSGEGSKGKV---RKKRHGRSLRGLNSNDGGSNGRGMRLREVEGGNSGV---RDMSWRDT 509
             +  G+KG +   R+ R+GR+ R L S+           RE++ G +G+   + +     
Sbjct: 243  SNSNGTKGNIYEERRTRNGRTERNLKSSK----------RELKPGKNGLDRRQRVPGPQA 292

Query: 508  NNGLDSRRVGLDRENSGRSRVVKSANSEVYDMDLQRDGNYWFK 380
            +NG      G D   S      + ++SEVYDM L++DG+Y F+
Sbjct: 293  HNGNTQYGSGKDFRRS------RGSHSEVYDMSLEQDGSYRFQ 329


>ref|XP_004147935.1| PREDICTED: uncharacterized protein LOC101220703 [Cucumis sativus]
          Length = 363

 Score =  219 bits (557), Expect = 2e-54
 Identities = 133/298 (44%), Positives = 170/298 (57%), Gaps = 26/298 (8%)
 Frame = -1

Query: 1195 IRMGGGPRTFPGGVNKWQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERP 1016
            IRMGGGPRT+PGGV+KWQWKRM                 QIYEMRKRAELKAAVS+LERP
Sbjct: 75   IRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERP 134

Query: 1015 WEVVEKAPKLFSASADEQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGV 836
            WEVVEKAP LFS  ADEQV+VLADRFQ+PGGFDLW+E+DGP+LF+TVD  PSARFFPKGV
Sbjct: 135  WEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGV 194

Query: 835  VHSIRPYGRVND-----EIDVKIG-----SFDRVNDXXXXXXXXXXXXXGSFDEYVEKRN 686
            VHS+RPY  +        +D + G     +F   N               S D+  +  N
Sbjct: 195  VHSVRPYRSITGSESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN 254

Query: 685  VLNEGRS----------GEGSKGKV---RKKRHGRSLRGLNSNDGGSNGRGMRLREVEGG 545
              +   S            G+KG +   R+ R+GR+ R L S+           RE++ G
Sbjct: 255  YSDTEGSYPRHSSAPSISNGTKGNIYEERRTRNGRTERNLKSSK----------RELKPG 304

Query: 544  NSGV---RDMSWRDTNNGLDSRRVGLDRENSGRSRVVKSANSEVYDMDLQRDGNYWFK 380
             +G+   + +     +NG      G D   S      + ++SEVYDM L++DG+Y F+
Sbjct: 305  KNGLDRRQRVPGPQAHNGNTQYGSGKDFRRS------RGSHSEVYDMSLEQDGSYRFQ 356


>ref|XP_002323529.1| predicted protein [Populus trichocarpa] gi|222868159|gb|EEF05290.1|
            predicted protein [Populus trichocarpa]
          Length = 223

 Score =  214 bits (544), Expect = 6e-53
 Identities = 130/269 (48%), Positives = 154/269 (57%)
 Frame = -1

Query: 1195 IRMGGGPRTFPGGVNKWQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERP 1016
            IRMGGGPRT+PGGV+KWQWKRM                 QIYEMRKRAELKA+VSELERP
Sbjct: 25   IRMGGGPRTYPGGVSKWQWKRMQKNKAKQLLKARLSRERQIYEMRKRAELKASVSELERP 84

Query: 1015 WEVVEKAPKLFSASADEQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGV 836
            WEVV+KAPKLFS  ADEQV+VLADRFQKPGGFDLWSE+DGP+LF+T DG PSARFFPKGV
Sbjct: 85   WEVVQKAPKLFSVGADEQVKVLADRFQKPGGFDLWSERDGPQLFETPDGVPSARFFPKGV 144

Query: 835  VHSIRPYGRVNDEIDVKIGSFDRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLNEGRSGEG 656
            VHS++PYG+V+       G F+                  +FD                G
Sbjct: 145  VHSVKPYGKVSAS-----GGFN------------------AFD---------------SG 166

Query: 655  SKGKVRKKRHGRSLRGLNSNDGGSNGRGMRLREVEGGNSGVRDMSWRDTNNGLDSRRVGL 476
              G  ++KR G    G+++ D G N R           +G R    R    GL +RR   
Sbjct: 167  QVGFEKEKRVG----GISNFDAGGNNR---------SKNGSRISKTR----GLQNRR--- 206

Query: 475  DRENSGRSRVVKSANSEVYDMDLQRDGNY 389
                         +NSEV+ M LQRDG+Y
Sbjct: 207  ------------DSNSEVHVMSLQRDGSY 223


>ref|XP_002309092.1| predicted protein [Populus trichocarpa] gi|222855068|gb|EEE92615.1|
            predicted protein [Populus trichocarpa]
          Length = 254

 Score =  209 bits (533), Expect = 1e-51
 Identities = 136/320 (42%), Positives = 164/320 (51%)
 Frame = -1

Query: 1327 SLPLQPPKNLSISSSTYLSGQTLLTLIPKFXXXXXXXXXXXXXLIRMGGGPRTFPGGVNK 1148
            +L L   K LS  +  +      LTL PK              +IRMGGGPRTFPGGV+K
Sbjct: 7    TLHLSFSKTLSSQNPLFFPKPFSLTLPPK-----------TTIIIRMGGGPRTFPGGVSK 55

Query: 1147 WQWKRMXXXXXXXXXXXXXXXXXQIYEMRKRAELKAAVSELERPWEVVEKAPKLFSASAD 968
            WQWKRM                 QIYEMRKRAELKAAVSELERPWEVV+KAPKLFS  AD
Sbjct: 56   WQWKRMQKNKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVDKAPKLFSVGAD 115

Query: 967  EQVQVLADRFQKPGGFDLWSEKDGPELFKTVDGFPSARFFPKGVVHSIRPYGRVNDEIDV 788
            EQV+VLADRFQKPGGFDLWSE+DGP+LF+T DG PSARFFP GVV +++PYG+V+     
Sbjct: 116  EQVKVLADRFQKPGGFDLWSERDGPQLFETPDGVPSARFFPTGVVQTVKPYGKVS----- 170

Query: 787  KIGSFDRVNDXXXXXXXXXXXXXGSFDEYVEKRNVLNEGRSGEGSKGKVRKKRHGRSLRG 608
                                                    SG G  G  ++KR G    G
Sbjct: 171  ---------------------------------------ASGFGQVGFEKEKRVG----G 187

Query: 607  LNSNDGGSNGRGMRLREVEGGNSGVRDMSWRDTNNGLDSRRVGLDRENSGRSRVVKSANS 428
              +   G + R  R                  +NNG    R+  +R +S          S
Sbjct: 188  TTNRSAGRDNRISR------------------SNNG---SRINRNRRDS---------KS 217

Query: 427  EVYDMDLQRDGNYWFKEETE 368
            +VYD+ LQ+DG+Y F+ E E
Sbjct: 218  DVYDISLQQDGSYGFQVENE 237


Top