BLASTX nr result
ID: Angelica22_contig00016288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00016288 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 81 1e-13 emb|CBI37850.3| unnamed protein product [Vitis vinifera] 81 1e-13 ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 80 2e-13 ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|2... 78 8e-13 ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc... 75 5e-12 >ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera] Length = 609 Score = 80.9 bits (198), Expect = 1e-13 Identities = 42/84 (50%), Positives = 51/84 (60%) Frame = +3 Query: 48 HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227 H +N+AGFV+LRF+NTQ A+SAQ ALHGRWF+GKMITATF+ Sbjct: 553 HIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFM---------------- 596 Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299 LPQNYE++FPDSR Sbjct: 597 -----------LPQNYEAKFPDSR 609 >emb|CBI37850.3| unnamed protein product [Vitis vinifera] Length = 427 Score = 80.9 bits (198), Expect = 1e-13 Identities = 42/84 (50%), Positives = 51/84 (60%) Frame = +3 Query: 48 HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227 H +N+AGFV+LRF+NTQ A+SAQ ALHGRWF+GKMITATF+ Sbjct: 371 HIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFM---------------- 414 Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299 LPQNYE++FPDSR Sbjct: 415 -----------LPQNYEAKFPDSR 427 >ref|XP_002516388.1| splicing factor, putative [Ricinus communis] gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis] Length = 609 Score = 79.7 bits (195), Expect = 2e-13 Identities = 42/84 (50%), Positives = 50/84 (59%) Frame = +3 Query: 48 HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227 H +N+AGFVYLRF+NTQ A+SAQ ALHGRWF+GKMITATF+V Sbjct: 553 HIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMV--------------- 597 Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299 PQ YE++FPDSR Sbjct: 598 ------------PQVYETKFPDSR 609 >ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa] Length = 348 Score = 77.8 bits (190), Expect = 8e-13 Identities = 39/84 (46%), Positives = 50/84 (59%) Frame = +3 Query: 48 HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227 H +N+AGFVY+RF+N Q A++AQHALHGRWF+GK+ITATF+V Sbjct: 292 HIYVDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMV--------------- 336 Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299 PQ YE++FPDSR Sbjct: 337 ------------PQTYEAKFPDSR 348 >ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max] Length = 600 Score = 75.1 bits (183), Expect = 5e-12 Identities = 39/84 (46%), Positives = 49/84 (58%) Frame = +3 Query: 48 HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227 H + +AGFVYLRF++TQ A+SAQ ALHGRWF+GKMITA+F+V Sbjct: 544 HIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMV--------------- 588 Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299 PQ+YE +FPDSR Sbjct: 589 ------------PQSYEDKFPDSR 600