BLASTX nr result

ID: Angelica22_contig00016288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016288
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...    81   1e-13
emb|CBI37850.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...    80   2e-13
ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...    75   5e-12

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 51/84 (60%)
 Frame = +3

Query: 48  HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227
           H    +N+AGFV+LRF+NTQ A+SAQ ALHGRWF+GKMITATF+                
Sbjct: 553 HIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFM---------------- 596

Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299
                      LPQNYE++FPDSR
Sbjct: 597 -----------LPQNYEAKFPDSR 609


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 51/84 (60%)
 Frame = +3

Query: 48  HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227
           H    +N+AGFV+LRF+NTQ A+SAQ ALHGRWF+GKMITATF+                
Sbjct: 371 HIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFM---------------- 414

Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299
                      LPQNYE++FPDSR
Sbjct: 415 -----------LPQNYEAKFPDSR 427


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/84 (50%), Positives = 50/84 (59%)
 Frame = +3

Query: 48  HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227
           H    +N+AGFVYLRF+NTQ A+SAQ ALHGRWF+GKMITATF+V               
Sbjct: 553 HIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMV--------------- 597

Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299
                       PQ YE++FPDSR
Sbjct: 598 ------------PQVYETKFPDSR 609


>ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|222849157|gb|EEE86704.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/84 (46%), Positives = 50/84 (59%)
 Frame = +3

Query: 48  HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227
           H    +N+AGFVY+RF+N Q A++AQHALHGRWF+GK+ITATF+V               
Sbjct: 292 HIYVDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMV--------------- 336

Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299
                       PQ YE++FPDSR
Sbjct: 337 ------------PQTYEAKFPDSR 348


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/84 (46%), Positives = 49/84 (58%)
 Frame = +3

Query: 48  HSSKPRNTAGFVYLRFDNTQDAVSAQHALHGRWFSGKMITATFLVIERSFSFHQIYIIK* 227
           H    + +AGFVYLRF++TQ A+SAQ ALHGRWF+GKMITA+F+V               
Sbjct: 544 HIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMV--------------- 588

Query: 228 *SNNPSLIILQLPQNYESRFPDSR 299
                       PQ+YE +FPDSR
Sbjct: 589 ------------PQSYEDKFPDSR 600


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