BLASTX nr result

ID: Angelica22_contig00016190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016190
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra...   198   1e-48
ref|XP_003595880.1| Mediator of RNA polymerase II transcription ...   193   3e-47
ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II tra...   192   5e-47
ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|2...   192   5e-47
ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymera...   192   8e-47

>ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22
           [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed
           protein product [Vitis vinifera]
          Length = 150

 Score =  198 bits (503), Expect = 1e-48
 Identities = 100/122 (81%), Positives = 112/122 (91%)
 Frame = +2

Query: 215 QKQKTLQQRVDNDIGNIVDNFSFIVNVARVNDPPVRNSQEAFMMEMRASRMVQAADSLLK 394
           QKQKTL QRV+ DI N+VD+F+F+VNVARVNDPPVRNSQEAFMMEMRA+RMVQAADSLLK
Sbjct: 21  QKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80

Query: 395 LVSELKQTAIFSGFATLNDHVEQRTEELNELAEKTDGMLARIGEDAAASLTELESHYYSS 574
           LVSELKQTAIFSGFA+LNDHV+QR  E N+ AEKTD +LARIGE+AAASL ELESHYYSS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSS 140

Query: 575 VR 580
            +
Sbjct: 141 AQ 142


>ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 150

 Score =  193 bits (491), Expect = 3e-47
 Identities = 101/122 (82%), Positives = 109/122 (89%)
 Frame = +2

Query: 215 QKQKTLQQRVDNDIGNIVDNFSFIVNVARVNDPPVRNSQEAFMMEMRASRMVQAADSLLK 394
           QKQKTL QRV+ DI NIVDNFS +VNVARVNDPPVRNSQEAFMMEMRA+RMVQAADSLLK
Sbjct: 21  QKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 80

Query: 395 LVSELKQTAIFSGFATLNDHVEQRTEELNELAEKTDGMLARIGEDAAASLTELESHYYSS 574
           LVSELKQTAIFSGFA+LNDHVEQR  E N+LAEKTD  L+ IGE+AAASL ELESHY SS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVEQRRLEFNQLAEKTDHTLSTIGEEAAASLKELESHYSSS 140

Query: 575 VR 580
            +
Sbjct: 141 AQ 142


>ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like [Cucumis sativus]
           gi|449527521|ref|XP_004170759.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22b-like
           [Cucumis sativus]
          Length = 150

 Score =  192 bits (489), Expect = 5e-47
 Identities = 99/128 (77%), Positives = 115/128 (89%), Gaps = 1/128 (0%)
 Frame = +2

Query: 215 QKQKTLQQRVDNDIGNIVDNFSFIVNVARVNDPPVRNSQEAFMMEMRASRMVQAADSLLK 394
           QKQK L QRV+ DI NIVDNF+ +VNV+RVNDPPVRNSQE+FMMEMRA+RMVQAADSLLK
Sbjct: 21  QKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLK 80

Query: 395 LVSELKQTAIFSGFATLNDHVEQRTEELNELAEKTDGMLARIGEDAAASLTELESHYYSS 574
           LVSELKQTAIFSGFA+LNDHVEQR  E N+ A++TD +L+RIGE+AAA+L ELESHYYSS
Sbjct: 81  LVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLSRIGEEAAANLKELESHYYSS 140

Query: 575 V-RTNQNA 595
             RT+QN+
Sbjct: 141 TQRTDQNS 148


>ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|222852038|gb|EEE89585.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  192 bits (489), Expect = 5e-47
 Identities = 100/126 (79%), Positives = 112/126 (88%), Gaps = 1/126 (0%)
 Frame = +2

Query: 215 QKQKTLQQRVDNDIGNIVDNFSFIVNVARVNDPPVRNSQEAFMMEMRASRMVQAADSLLK 394
           QKQK L QRV+ DI +IVDNF+ +VNVAR+ND PVRNSQEAFMMEMRA+RMVQAADSLLK
Sbjct: 29  QKQKALMQRVETDIAHIVDNFTHLVNVARINDTPVRNSQEAFMMEMRAARMVQAADSLLK 88

Query: 395 LVSELKQTAIFSGFATLNDHVEQRTEELNELAEKTDGMLARIGEDAAASLTELESHYYSS 574
           LVSELKQTAIFSGFA+LNDHV+QR  E  +LAEKTD MLARIGE+AAASL ELE+HYYSS
Sbjct: 89  LVSELKQTAIFSGFASLNDHVDQRIGEFTQLAEKTDSMLARIGEEAAASLKELETHYYSS 148

Query: 575 V-RTNQ 589
             RT+Q
Sbjct: 149 AQRTSQ 154


>ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 22-like [Glycine max]
          Length = 156

 Score =  192 bits (487), Expect = 8e-47
 Identities = 99/122 (81%), Positives = 110/122 (90%)
 Frame = +2

Query: 215 QKQKTLQQRVDNDIGNIVDNFSFIVNVARVNDPPVRNSQEAFMMEMRASRMVQAADSLLK 394
           QKQKTL QRV+ DI NIVDNF+ +VNVARVNDPPVRNSQEAFMMEMRA+RMVQAADSLLK
Sbjct: 27  QKQKTLLQRVEGDIANIVDNFNHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLK 86

Query: 395 LVSELKQTAIFSGFATLNDHVEQRTEELNELAEKTDGMLARIGEDAAASLTELESHYYSS 574
           LVSELKQTAIFSGFA+LNDHVE+R  E N+LAEKTD  L+R+GE+AAASL  LESHY SS
Sbjct: 87  LVSELKQTAIFSGFASLNDHVEERRIEFNQLAEKTDRTLSRVGEEAAASLKGLESHYSSS 146

Query: 575 VR 580
           V+
Sbjct: 147 VQ 148


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