BLASTX nr result

ID: Angelica22_contig00016172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016172
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   125   5e-27
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   112   4e-23
ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   112   4e-23
emb|CAN79000.1| hypothetical protein VITISV_037561 [Vitis vinifera]   112   4e-23
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   111   7e-23

>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
           gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
           Nup43-like [Cucumis sativus]
          Length = 350

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/107 (58%), Positives = 77/107 (71%)
 Frame = +3

Query: 3   TSLKVSQTHNKPLIAVSSFSGSVRFLFAGSGEVGFDGSELVVPEKVLHVGPISCIDLGGN 182
           +SLK SQ H  PL+  S+++GS+  L     E   D SEL VPEK+LH GPISC+D+   
Sbjct: 76  SSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLD-SELSVPEKMLHDGPISCVDVMDG 134

Query: 183 GSECVCVGEDGRVSLVSVGEGDLRYRKVFDSCGLFSYDAVKWASPSE 323
           G EC+ V EDGRVSLVSVGE  L YR++FDS GL SY+AVKWASP+E
Sbjct: 135 GGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTE 181


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/107 (53%), Positives = 72/107 (67%)
 Frame = +3

Query: 3   TSLKVSQTHNKPLIAVSSFSGSVRFLFAGSGEVGFDGSELVVPEKVLHVGPISCIDLGGN 182
           +SLK S    KPLI  S+ SGS+ FLF+ S     + SE+ +PE  LH  P SC+DL   
Sbjct: 70  SSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLE-SEVSIPEGALHSVPASCVDLLDG 128

Query: 183 GSECVCVGEDGRVSLVSVGEGDLRYRKVFDSCGLFSYDAVKWASPSE 323
           G ECV VGEDG+V+LV +G+ +L YR++FDS GL SY AV WASP E
Sbjct: 129 GVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPME 175


>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
           gi|297743697|emb|CBI36580.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   TSLKVSQTHNKPLIAVSSFSGSVRFLFAGSGEVGFDGS---ELVVPEKVLHVGPISCIDL 173
           +SL +S + +KPLIA S+FSGS+  L      + FD S   E  VPEK LHVG ISC+DL
Sbjct: 79  SSLSLSLSAHKPLIAASTFSGSLHILL-----LDFDASVQSEFSVPEKSLHVGAISCVDL 133

Query: 174 GGNGSECVCVGEDGRVSLVSVGEGD-LRYRKVFDSCGLFSYDAVKWASPSE 323
             +G ECV VGEDGRV+LV+ G+G  L YR+V+DS GL SY A KWASP+E
Sbjct: 134 QESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTE 184


>emb|CAN79000.1| hypothetical protein VITISV_037561 [Vitis vinifera]
          Length = 266

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   TSLKVSQTHNKPLIAVSSFSGSVRFLFAGSGEVGFDGS---ELVVPEKVLHVGPISCIDL 173
           +SL +S + +KPLIA S+FSGS+  L      + FD S   E  VPEK LHVG ISC+DL
Sbjct: 101 SSLSLSLSAHKPLIAASTFSGSLHILL-----LDFDASVQSEFSVPEKSLHVGAISCVDL 155

Query: 174 GGNGSECVCVGEDGRVSLVSVGEGD-LRYRKVFDSCGLFSYDAVKWASPSE 323
             +G ECV VGEDGRV+LV+ G+G  L YR+V+DS GL SY A KWASP+E
Sbjct: 156 QESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTE 206


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/107 (53%), Positives = 73/107 (68%)
 Frame = +3

Query: 3   TSLKVSQTHNKPLIAVSSFSGSVRFLFAGSGEVGFDGSELVVPEKVLHVGPISCIDLGGN 182
           +SLK S    KPLI  S+ SGS+ FLF+ S +     SE+ +PE  LH  P SC+DL   
Sbjct: 72  SSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLL-SEVSLPEGALHSLPASCVDLMDG 130

Query: 183 GSECVCVGEDGRVSLVSVGEGDLRYRKVFDSCGLFSYDAVKWASPSE 323
           G ECV VGEDG+V+LV +G+ +L YR++FDS GL SY AV+WASP E
Sbjct: 131 GVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPME 177


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