BLASTX nr result

ID: Angelica22_contig00016146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00016146
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81870.1| unknown [Solanum tuberosum]                            326   9e-87
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati...   313   5e-83
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei...   308   1e-81
gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium h...   308   2e-81

>gb|ABA81870.1| unknown [Solanum tuberosum]
          Length = 286

 Score =  326 bits (835), Expect = 9e-87
 Identities = 185/287 (64%), Positives = 201/287 (70%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1211 MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENVGATEDQFDCIDLSDNEIVKLENF 1032
            MVRLTADLIWKSPHFFNA+RERELDLRGNKI VIEN+GATEDQFD IDLSDNEIVKLENF
Sbjct: 1    MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60

Query: 1031 PYXXXXXXXXXXXXXXXXXXXXXGEFLPNLHSXXXXXXXXXXXVEIDPLASFPKLTFLSL 852
            PY                     GEFLP LH+           VEIDPLAS PKL FLSL
Sbjct: 61   PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL 120

Query: 851  LDNNITKKPNYRLYVIHKLKSLRLLDFKKVKLKXXXXXXXXXXXXXXXXXXXXXSVKTFV 672
            L+NNITK+PNYRLYVIHKLKSLRLLDF+KVK K                     SVKT V
Sbjct: 121  LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKERLEASKLFASQEAEEQVKKESVKT-V 179

Query: 671  PGEIPAP-EVSKEEQAPKNVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLD 495
            P E+  P E  KE QA K VAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADL+
Sbjct: 180  PVEVAVPAEEPKEAQASKPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 239

Query: 494  IIDNDPVTANKNTNMDKIMTESEKEANDVTSNVNEQKNDGPADMEQE 354
            I D+D     ++   DK++T+S+ +AN    NV EQK DGP DMEQE
Sbjct: 240  IGDHDVTAKKEDAKEDKMVTDSDDKANKAEENVPEQKPDGPTDMEQE 286


>ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|222841164|gb|EEE78711.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  314 bits (805), Expect = 3e-83
 Identities = 178/287 (62%), Positives = 200/287 (69%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1211 MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENVGATEDQFDCIDLSDNEIVKLENF 1032
            MVRLTADLIWKSPHFFNA++ERELDLRGNKI VIEN+GATEDQFD IDLSDNEIVKLEN 
Sbjct: 1    MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 1031 PYXXXXXXXXXXXXXXXXXXXXXGEFLPNLHSXXXXXXXXXXXVEIDPLASFPKLTFLSL 852
            PY                     GE+LP LH+            EIDPL+S PKL FLSL
Sbjct: 61   PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSL 120

Query: 851  LDNNITKKPNYRLYVIHKLKSLRLLDFKKVKLKXXXXXXXXXXXXXXXXXXXXXSVKTFV 672
            LDN ITKKPNYRLYVIHKLKSLR+LDFKKVK K                     SVKTF 
Sbjct: 121  LDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAKERAEAEHLFSSKEVEEEAKRESVKTFT 180

Query: 671  PGEIP-APEVSKEEQAPKNVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLD 495
            PGEIP  PEV++E+QAPK VAPTPEQIIAIKAAIVNSQTLEEVARLE+AL SGQLPADL 
Sbjct: 181  PGEIPNIPEVAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240

Query: 494  IIDNDPVTANKNTNMDKIMTESEKEANDVTSNVNEQKNDGPADMEQE 354
            I+D+    + K  + DK+ T+S+ EA    +N+ EQK++    MEQE
Sbjct: 241  ILDDTGSNSVKEQD-DKMATDSQNEAE--PNNLEEQKDNEATPMEQE 284


>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
            gi|223548673|gb|EEF50164.1| U2 small nuclear
            ribonucleoprotein A, putative [Ricinus communis]
          Length = 287

 Score =  313 bits (803), Expect = 5e-83
 Identities = 173/287 (60%), Positives = 196/287 (68%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1211 MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENVGATEDQFDCIDLSDNEIVKLENF 1032
            MVRLTADLIWKSPHFFNA++ERELDLRGNKI VIEN+GATEDQFD IDLSDNEIVKLEN 
Sbjct: 1    MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 1031 PYXXXXXXXXXXXXXXXXXXXXXGEFLPNLHSXXXXXXXXXXXVEIDPLASFPKLTFLSL 852
            PY                     GEFLP LH+           VEIDPLAS PKL FLSL
Sbjct: 61   PYLTRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSL 120

Query: 851  LDNNITKKPNYRLYVIHKLKSLRLLDFKKVKLKXXXXXXXXXXXXXXXXXXXXXSVKTFV 672
            LDN+ITKKPNYRLY+IHKLKSLR+LDFKKVK K                     S KTF+
Sbjct: 121  LDNSITKKPNYRLYIIHKLKSLRVLDFKKVKSKERMEAENLFASKEVEEEAIRESAKTFI 180

Query: 671  PGEIP-APEVSKEEQAPKNVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLD 495
            PGE+P   E ++E+Q PK VAPTPEQIIAIKAAIVNSQTLEEVARLE+AL SGQ+P DL+
Sbjct: 181  PGEVPNVTEDAEEQQNPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQIPTDLN 240

Query: 494  IIDNDPVTANKNTNMDKIMTESEKEANDVTSNVNEQKNDGPADMEQE 354
            I DND          DK+ T+ + + +   SN++EQK+   A MEQE
Sbjct: 241  IFDNDSELNTVQEKDDKMATDGDNKTDHEPSNLDEQKDSDSASMEQE 287


>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
            gi|296085571|emb|CBI29303.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  308 bits (790), Expect = 1e-81
 Identities = 171/287 (59%), Positives = 194/287 (67%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1211 MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENVGATEDQFDCIDLSDNEIVKLENF 1032
            MVRLTADLIWKSPHFFNA+RERELDLRGNK+AVIEN+GATEDQFD IDLSDNEIVKLEN 
Sbjct: 1    MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60

Query: 1031 PYXXXXXXXXXXXXXXXXXXXXXGEFLPNLHSXXXXXXXXXXXVEIDPLASFPKLTFLSL 852
            PY                     GE+LP LH+            EIDPL+SFPKL FLSL
Sbjct: 61   PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120

Query: 851  LDNNITKKPNYRLYVIHKLKSLRLLDFKKVKLKXXXXXXXXXXXXXXXXXXXXXSVKTFV 672
            LDNNITKKPNYRLYVIH+LKSLRLLDFKKVK K                      +KTF 
Sbjct: 121  LDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNKERLEAENLFASKEVEEEAKQEPLKTFT 180

Query: 671  PGEIP-APEVSKEEQAPKNVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLD 495
            PGE+P A E ++E+Q PK V P+PE++IAIKAAIVNSQTLEEVARLE+ALKSGQLPADL 
Sbjct: 181  PGEMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 240

Query: 494  IIDNDPVTANKNTNMDKIMTESEKEANDVTSNVNEQKNDGPADMEQE 354
             +  +      N   DK+++ +   + D    V EQKND  A MEQE
Sbjct: 241  SLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVEEQKNDDVAPMEQE 287


>gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium hirsutum]
          Length = 285

 Score =  308 bits (789), Expect = 2e-81
 Identities = 174/287 (60%), Positives = 198/287 (68%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1211 MVRLTADLIWKSPHFFNALRERELDLRGNKIAVIENVGATEDQFDCIDLSDNEIVKLENF 1032
            MV+LTADLIWK PHFFNAL+ERELDLRGNKIAVIEN+GATEDQFD IDLSDNEIVKL+NF
Sbjct: 1    MVKLTADLIWKCPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLDNF 60

Query: 1031 PYXXXXXXXXXXXXXXXXXXXXXGEFLPNLHSXXXXXXXXXXXVEIDPLASFPKLTFLSL 852
            PY                     GEFLPNLH+           VEIDPL+S PKL FLSL
Sbjct: 61   PYLKRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLSSLPKLQFLSL 120

Query: 851  LDNNITKKPNYRLYVIHKLKSLRLLDFKKVKLKXXXXXXXXXXXXXXXXXXXXXSVKTFV 672
            LDNNITKKPNYRLYVIHKLKSLR+LDFKKVK K                     S KT  
Sbjct: 121  LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKAKERLEAENLFASKEAEEEIKKESTKTVA 180

Query: 671  PGEIP-APEVSKEEQAPKNVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLD 495
            P E+P   EV++EEQ PK VAPTPEQI+AIKAAIVNSQTLEEVARLE+AL++GQLPADL 
Sbjct: 181  PKEVPNVSEVAEEEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALQTGQLPADLK 240

Query: 494  IIDNDPVTANKNTNMDKIMTESEKEANDVTSNVNEQKNDGPADMEQE 354
            I  +D   A      +K +++ + E+N    N++E KN+ PA MEQE
Sbjct: 241  IPGDDTNAAKGGD--EKKVSDIQNESNVEPDNMDEDKNEEPAPMEQE 285


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