BLASTX nr result
ID: Angelica22_contig00016122
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00016122
(1117 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2... 132 2e-28
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch... 120 5e-25
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici... 115 2e-23
emb|CBI27200.3| unnamed protein product [Vitis vinifera] 114 3e-23
ref|NP_564986.1| ribosomal protein L7/L12 domain-containing prot... 113 1e-22
>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
predicted protein [Populus trichocarpa]
Length = 216
Score = 132 bits (332), Expect = 2e-28
Identities = 68/119 (57%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
Frame = -2
Query: 1023 MSLIFRIRGVLPNKIFLRPDVSGIGGYNSSGLV-RKYAQAVRKXXXXXXXXXEYDQRRLP 847
MSLI R+R LPN +P +S + N + ++ R +A+A RK E DQRRLP
Sbjct: 1 MSLISRLRHCLPNGFSTKPTISPLMPLNFNAVLSRGFAEAARKVEAEEEEEVEIDQRRLP 60
Query: 846 ADYDPATFDPTEHRSPPTERVWRLVDEITGLTLMDVAELGQIIMKKMGMKEPPIVGVMK 670
DYDPATFDPTEHRSPPTERV++LV+EI GLTLM+++ELG IIMK+M M EPP +GV+K
Sbjct: 61 TDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPTIGVLK 119
Score = 93.2 bits (230), Expect = 1e-16
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = -1
Query: 478 IIKEVRSFTDLGLKEAKELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 320
+IKEVRSFTDLGLKEAK+LVEK P+V KKGVSKEEGEQIIEKMKA+GAKVV+E
Sbjct: 164 VIKEVRSFTDLGLKEAKDLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216
>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449454778|ref|XP_004145131.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
gi|449472279|ref|XP_004153545.1| PREDICTED: 54S ribosomal
protein L12, mitochondrial-like isoform 1 [Cucumis
sativus] gi|449472282|ref|XP_004153546.1| PREDICTED: 54S
ribosomal protein L12, mitochondrial-like isoform 2
[Cucumis sativus] gi|449503353|ref|XP_004161960.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 1 [Cucumis sativus]
gi|449503355|ref|XP_004161961.1| PREDICTED: 54S ribosomal
protein L12, mitochondrial-like isoform 2 [Cucumis
sativus]
Length = 214
Score = 120 bits (302), Expect = 5e-25
Identities = 66/120 (55%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Frame = -2
Query: 1023 MSLIFRIRGVLPNKIF--LRPDVSGIGGYNSSGLVRKYAQAVRKXXXXXXXXXEYDQRRL 850
M L+ RI +LPN +R + N +GL R YAQ R E DQRRL
Sbjct: 1 MRLVSRISHLLPNVFANTIRSSTVALNPLNRNGLHRNYAQPSR--IEEEEEEVEIDQRRL 58
Query: 849 PADYDPATFDPTEHRSPPTERVWRLVDEITGLTLMDVAELGQIIMKKMGMKEPPIVGVMK 670
PADYDPA FDPTEHRSPPT+RV+RLVDEI+GLTL++VAE+ I+MKK+GM E P+ G MK
Sbjct: 59 PADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMK 118
Score = 89.0 bits (219), Expect = 2e-15
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -1
Query: 478 IIKEVRSFTDLGLKEAKELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 320
IIKEVRS TDLGLKEAK+LV+K P+V KKG+SKEEGEQI+EKMKALGAKV++E
Sbjct: 162 IIKEVRSLTDLGLKEAKDLVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214
>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
gi|223526735|gb|EEF28965.1| 50S ribosomal protein
L7/L12, putative [Ricinus communis]
Length = 301
Score = 115 bits (288), Expect = 2e-23
Identities = 60/87 (68%), Positives = 66/87 (75%)
Frame = -2
Query: 930 LVRKYAQAVRKXXXXXXXXXEYDQRRLPADYDPATFDPTEHRSPPTERVWRLVDEITGLT 751
L R YAQA RK DQRRLPADYDPATFDPTEHRSPPTERV++LVDE+ GLT
Sbjct: 120 LSRGYAQAARKDEEEEEEVEI-DQRRLPADYDPATFDPTEHRSPPTERVFKLVDEVAGLT 178
Query: 750 LMDVAELGQIIMKKMGMKEPPIVGVMK 670
L++VAEL IIMKK GM E P VGV+K
Sbjct: 179 LVEVAELSSIIMKKRGMTELPTVGVLK 205
Score = 89.4 bits (220), Expect = 2e-15
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -1
Query: 478 IIKEVRSFTDLGLKEAKELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 320
IIKEVRSFTDLGLKEAK+LVEK P++ K GVSKEE EQIIEKMKA+GAKVVME
Sbjct: 249 IIKEVRSFTDLGLKEAKDLVEKTPSILKAGVSKEEAEQIIEKMKAVGAKVVME 301
>emb|CBI27200.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 114 bits (286), Expect = 3e-23
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Frame = -2
Query: 975 LRPDVSGIGGYNSSGLV-----RKYAQAVRKXXXXXXXXXEYDQRRLPADYDPATFDPTE 811
LRP++ I + S L+ + A K E DQRRLPADYDPA FDPT+
Sbjct: 3 LRPELKPISPFPSRALLGSSSSTNFKAAANKVDDESEEEVEIDQRRLPADYDPANFDPTQ 62
Query: 810 HRSPPTERVWRLVDEITGLTLMDVAELGQIIMKKMGMKEPPIVGVMK 670
HRSPPT RV+RLVDEI GLTL++VAEL I+ KK+GMKEPP+V +MK
Sbjct: 63 HRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKLGMKEPPVVAIMK 109
Score = 78.6 bits (192), Expect = 3e-12
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = -1
Query: 478 IIKEVRSFTDLGLKEAKELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKV 329
IIKEVRSFTDLGLKEAK+LVEK P+V K GVSKEEGEQ++EK+KAL ++
Sbjct: 153 IIKEVRSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALDNQI 202
>ref|NP_564986.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis
thaliana] gi|334183805|ref|NP_001185360.1| ribosomal
protein L7/L12 domain-containing protein [Arabidopsis
thaliana] gi|13430422|gb|AAK25833.1|AF360123_1 unknown
protein [Arabidopsis thaliana] gi|2194123|gb|AAB61098.1|
Similar to Secale chloroplast ribosomal protein L12
(gb|SCL121A). EST gb|H36579 comes from this gene
[Arabidopsis thaliana] gi|15293181|gb|AAK93701.1| unknown
protein [Arabidopsis thaliana]
gi|332196909|gb|AEE35030.1| ribosomal protein L7/L12
domain-containing protein [Arabidopsis thaliana]
gi|332196910|gb|AEE35031.1| ribosomal protein L7/L12
domain-containing protein [Arabidopsis thaliana]
Length = 208
Score = 113 bits (282), Expect = 1e-22
Identities = 64/118 (54%), Positives = 76/118 (64%)
Frame = -2
Query: 1023 MSLIFRIRGVLPNKIFLRPDVSGIGGYNSSGLVRKYAQAVRKXXXXXXXXXEYDQRRLPA 844
MSL+ R R L +S IGGY R Y Q + E+DQR+LP
Sbjct: 1 MSLVLRFRQHLSQTSSRLSLLSRIGGY------RSYTQPAK---IEDEEEEEFDQRKLPT 51
Query: 843 DYDPATFDPTEHRSPPTERVWRLVDEITGLTLMDVAELGQIIMKKMGMKEPPIVGVMK 670
DYDPATFDPTEHRSPPT+RV+RLVDEI+ LTL++++ELG IIMKK GM E P V VMK
Sbjct: 52 DYDPATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMK 109
Score = 85.9 bits (211), Expect = 2e-14
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = -1
Query: 478 IIKEVRSFTDLGLKEAKELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 320
IIKE+RSFTDLGLKEAK LVEK PA+ K G+SKEEGE+I+EK+KALGAKVV+E
Sbjct: 156 IIKELRSFTDLGLKEAKALVEKTPAILKAGLSKEEGEKILEKLKALGAKVVLE 208