BLASTX nr result

ID: Angelica22_contig00015940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015940
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]    73   4e-15
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...    73   4e-15
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-14
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-14
ref|XP_002337118.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-14

>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score = 72.8 bits (177), Expect(2) = 4e-15
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = -3

Query: 678 MAEEAGMSMVKQTDDSVLYGKCGNPMSPNAANMCVKCSRSEVDITE 541
           MAEEAGM MV QT  SVL  KCG PM+PNAANMCVKC RSE+DITE
Sbjct: 1   MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITE 46



 Score = 35.8 bits (81), Expect(2) = 4e-15
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -2

Query: 541 GLKKHGIIIHCVKCNTYLQLQPPRSLINS 455
           GL+KH  I+HC +C+TY  LQPP++ I +
Sbjct: 47  GLQKHVTIVHCPECDTY--LQPPKTWIKA 73


>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score = 72.8 bits (177), Expect(2) = 4e-15
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = -3

Query: 678 MAEEAGMSMVKQTDDSVLYGKCGNPMSPNAANMCVKCSRSEVDITE 541
           MAEEAGM MV QT  SVL  KCG PM+PNAANMCVKC RSE+DITE
Sbjct: 1   MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITE 46



 Score = 35.8 bits (81), Expect(2) = 4e-15
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -2

Query: 541 GLKKHGIIIHCVKCNTYLQLQPPRSLINS 455
           GL+KH  I+HC +C+TY  LQPP++ I +
Sbjct: 47  GLQKHVTIVHCPECDTY--LQPPKTWIKA 73


>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 74.3 bits (181), Expect(2) = 1e-14
 Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = -3

Query: 678 MAEEAGMSMVKQTDDSVLYGKCGNPMSPNAANMCVKCSRSEVDITE-V*KNMVL 520
           MAEEAGM MV QT  SVL  KCG PM PNAANMCVKC RSEVDITE + KN++L
Sbjct: 1   MAEEAGMFMVHQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVIL 54



 Score = 32.3 bits (72), Expect(2) = 1e-14
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 541 GLKKHGIIIHCVKCNTYLQLQPPRSLINS 455
           GLKK+ I++HC +C+TY  L PP + I +
Sbjct: 47  GLKKNVILLHCPECDTY--LDPPSTRIRA 73


>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 74.3 bits (181), Expect(2) = 1e-14
 Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = -3

Query: 678 MAEEAGMSMVKQTDDSVLYGKCGNPMSPNAANMCVKCSRSEVDITE-V*KNMVL 520
           MAEEAGM MV QT  SVL  KCG PM PNAANMCVKC RSEVDITE + KN++L
Sbjct: 1   MAEEAGMFMVHQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVIL 54



 Score = 32.3 bits (72), Expect(2) = 1e-14
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 541 GLKKHGIIIHCVKCNTYLQLQPPRSLINS 455
           GLKK+ I++HC +C+TY  L PP + I +
Sbjct: 47  GLKKNVILLHCPECDTY--LDPPSTRIRA 73


>ref|XP_002337118.1| predicted protein [Populus trichocarpa] gi|222838312|gb|EEE76677.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 74.3 bits (181), Expect(2) = 2e-14
 Identities = 40/54 (74%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = -3

Query: 678 MAEEAGMSMVKQTDDSVLYGKCGNPMSPNAANMCVKCSRSEVDITE-V*KNMVL 520
           MAEEAGM MV QT  SVL  KCG PM PNAANMCVKC RSEVDITE + KN++L
Sbjct: 1   MAEEAGMFMVHQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVIL 54



 Score = 32.3 bits (72), Expect(2) = 2e-14
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 541 GLKKHGIIIHCVKCNTYLQLQPPRSLINS 455
           GLKK+ I++HC +C+TY  L PP + I +
Sbjct: 47  GLKKNVILLHCPECDTY--LDPPSTRIRA 73


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