BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015930
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532846.1| DNA binding protein, putative [Ricinus commu...   104   3e-20
ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-contain...   103   5e-20
ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsi...   100   5e-19
emb|CBI16127.3| unnamed protein product [Vitis vinifera]               99   2e-18
ref|XP_002299872.1| methyl binding domain protein [Populus trich...    91   5e-16

>ref|XP_002532846.1| DNA binding protein, putative [Ricinus communis]
           gi|223527383|gb|EEF29524.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 234

 Score =  104 bits (259), Expect = 3e-20
 Identities = 70/226 (30%), Positives = 97/226 (42%), Gaps = 48/226 (21%)
 Frame = +1

Query: 184 NTTTDSVATPPPGFAAAGNSSHAPVGGPGSDPLLGSDAFIAA----------------EG 315
           N+T    AT P   A   +S    +     DPLL + +FI A                  
Sbjct: 3   NSTHTGQATNPICRADPHSSDQPDLA---EDPLLRNGSFIDATTIKPNIDNNVSNNNNNN 59

Query: 316 GSEAKRAKKGSEDGEGTP--------------------GWLPAGWTITTKTRANGATAGT 435
             + + A  G E  E TP                     WLP GW +  + RA+GATAGT
Sbjct: 60  NYQQQEANVGVEQSEATPLKSRRKVPVTMAPAPSADSANWLPPGWLVEDRVRASGATAGT 119

Query: 436 VDRYYIEPVTGQRFRSKIEVKRYLETGSRNKSN------------SDXXXXXXXXXXXXX 579
           VD+YYIEPVTG+RFRSK EV+ +LETG++ K+             ++             
Sbjct: 120 VDKYYIEPVTGRRFRSKKEVQYFLETGTKKKTKRGMENSEGDVNFTESPGSQKSKKASKN 179

Query: 580 XXXXXFRFDFENTPREVTWSLVDEDQGLWKPSIGEEQVPETTAQEW 717
                  FD+ N P  + W+L+D +Q  W P +G ++V E   Q W
Sbjct: 180 AKVQKRNFDYLNVPDRIEWALIDANQDAWTPFLGGQKVAEYDRQNW 225


>ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
           [Vitis vinifera]
          Length = 297

 Score =  103 bits (258), Expect = 5e-20
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%)
 Frame = +1

Query: 115 DPLLSSDSFICNDPNQQTQP----DPINTTTDSVATPPPGFAAA-GNSSHAPVGGPGSDP 279
           DPLL S  FI  +  +  +     + ++  T S A+   G  A  G+S+ A    P  D 
Sbjct: 81  DPLLKSSCFIETNVVRNGETLIGAETVDLQTASHASQSCGVGAPDGDSNWAGEVRPSLDN 140

Query: 280 LLGSDAFIAAEGGSEAKRAKKGSEDGEGTPG------WLPAGWTITTKTRANGATAGTVD 441
                   A++  S+ +R +K + +   +        WLP GW +  + R++GA+AG+ D
Sbjct: 141 S-------ASQSESQPRRGRKRASEATASMASVEREDWLPPGWIVEGRVRSSGASAGSRD 193

Query: 442 RYYIEPVTGQRFRSKIEVKRYLETG---SRNKSNSDXXXXXXXXXXXXXXXXXXFRFDFE 612
           +Y+IEP+TG+RFRSK EV+ YLETG    + K N D                    F+FE
Sbjct: 194 KYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKNPD-------NSPEKGTKSPPLNFNFE 246

Query: 613 NTPREVTWSLVDEDQGLWKPSIGEEQVPETTAQEWASTFELTCQMK*W 756
           + P  V W      +G W P I  ++VPE++ ++WA+ FE       W
Sbjct: 247 DVPDTVKWVRTGSSEG-WTPFINGQEVPESSKRDWAAAFEFLALKSSW 293


>ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
           gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 6;
           Short=AtMBD6; Short=MBD06; AltName:
           Full=Methyl-CpG-binding protein MBD6
           gi|8885544|dbj|BAA97474.1| unnamed protein product
           [Arabidopsis thaliana] gi|28416643|gb|AAO42852.1|
           At5g59380 [Arabidopsis thaliana]
           gi|110743343|dbj|BAE99559.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009795|gb|AED97178.1|
           methyl-CPG-binding domain 6 protein [Arabidopsis
           thaliana]
          Length = 225

 Score =  100 bits (249), Expect = 5e-19
 Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 16/224 (7%)
 Frame = +1

Query: 106 FTPDPLLSSDSFICNDPNQQTQPDPINTTTDSVATPPPGFAAAGNSSHAPVGGPGSDPLL 285
           F PDPLL+S +FI +  +          T DS A   P     G      + G G    +
Sbjct: 9   FPPDPLLASGAFISSAGDG---------TLDSSAKRRPIQGGIG------ISGSGESVRI 53

Query: 286 GSDAFIAAEGGSEAKRAKKGSEDGEGTPG--WLPAGWTITTKTRANGATAGTVDRYYIEP 459
           G      A G  +     +        PG  WLP GW +  K R +GATAG+VD+YY EP
Sbjct: 54  GM-----ANGTDQVNHQTESKSRKRAAPGDNWLPPGWRVEDKIRTSGATAGSVDKYYYEP 108

Query: 460 VTGQRFRSKIEVKRYLETGSRNKS--------------NSDXXXXXXXXXXXXXXXXXXF 597
            TG++FRS+ EV  YLE G+  +                                     
Sbjct: 109 NTGRKFRSRTEVLYYLEHGTSKRGTKKAENTYFNPDHFEGQGSNRVTRTATVPPPPPPPL 168

Query: 598 RFDFENTPREVTWSLVDEDQGLWKPSIGEEQVPETTAQEWASTF 729
            FDF+N P +V+WS+ +  +  W P+IG+ +V ++  ++W++ F
Sbjct: 169 DFDFKNPPDKVSWSMANAGEEGWIPNIGDVKVQDSVRRDWSTAF 212


>emb|CBI16127.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
 Frame = +1

Query: 373 WLPAGWTITTKTRANGATAGTVDRYYIEPVTGQRFRSKIEVKRYLETG---SRNKSNSDX 543
           WLP GW +  + R++GA+AG+ D+Y+IEP+TG+RFRSK EV+ YLETG    + K N D 
Sbjct: 9   WLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKNPD- 67

Query: 544 XXXXXXXXXXXXXXXXXFRFDFENTPREVTWSLVDEDQGLWKPSIGEEQVPETTAQEWAS 723
                              F+FE+ P  V W      +G W P I  ++VPE++ ++WA+
Sbjct: 68  ------NSPEKGTKSPPLNFNFEDVPDTVKWVRTGSSEG-WTPFINGQEVPESSKRDWAA 120

Query: 724 TFELTCQMK*W 756
            FE       W
Sbjct: 121 AFEFLALKSSW 131


>ref|XP_002299872.1| methyl binding domain protein [Populus trichocarpa]
           gi|118483055|gb|ABK93437.1| unknown [Populus
           trichocarpa] gi|222847130|gb|EEE84677.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 214

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 58/187 (31%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
 Frame = +1

Query: 253 PVGGPGSDPLLGSDAFIAAEGGSEAKRAKKGSED-GEGTP-----------------GWL 378
           P G    DPLL + + I     S A      + D G   P                  WL
Sbjct: 15  PPGPKADDPLLQNGSSIDPNKHSTADETLNRTNDKGNQQPVTPVREKRRLSETAVDTSWL 74

Query: 379 PAGWTITTKTRANGATAGTVDRYYIEPVTGQRFRSKIEVKRYLETGSRNK---------- 528
           P GW +  + R +GATAGT D+YYIEPV+G+RFRSK +V+ YLETG+  K          
Sbjct: 75  PPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTLKKRGKVAENVDA 134

Query: 529 SNSDXXXXXXXXXXXXXXXXXXFRFDFENTPREVTWSLVDEDQGLWKPSIGEEQVPETTA 708
             +                   + FD  N P    W L + ++  W P I  ++VP    
Sbjct: 135 DTNSAENSKSSKNKSGANTNFAWNFDSFNVPDRTEWFLTEANEDTWTPFIDGKKVPLYDK 194

Query: 709 QEWASTF 729
           ++W  TF
Sbjct: 195 EQWDFTF 201