BLASTX nr result

ID: Angelica22_contig00015763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015763
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627716.1| Splicing factor 4-like protein [Medicago tru...    72   6e-11
ref|XP_003531431.1| PREDICTED: SURP and G-patch domain-containin...    70   1e-10
ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002298445.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containin...    65   6e-09

>ref|XP_003627716.1| Splicing factor 4-like protein [Medicago truncatula]
           gi|355521738|gb|AET02192.1| Splicing factor 4-like
           protein [Medicago truncatula]
          Length = 498

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/71 (53%), Positives = 46/71 (64%)
 Frame = +3

Query: 3   NDSRKPSTNASGGKLAFSLKQKSKLVAPPVKLXXXXXXXXXXGYSSGNGSTKRQKVGQSD 182
           ND++K S   S GKLAFSLKQKSKLV PPVKL          GY S +  TKRQK+GQ D
Sbjct: 58  NDAKKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSIDALTKRQKLGQDD 117

Query: 183 APVQPTKRVDV 215
              Q ++++DV
Sbjct: 118 GIEQSSRQLDV 128


>ref|XP_003531431.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like [Glycine max]
          Length = 435

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 45/71 (63%)
 Frame = +3

Query: 3   NDSRKPSTNASGGKLAFSLKQKSKLVAPPVKLXXXXXXXXXXGYSSGNGSTKRQKVGQSD 182
           ND+RK S   S GKLAFSLKQKSKLV PPVKL          GY S +   KRQK+GQ +
Sbjct: 64  NDTRKTSQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEETEAGYVSNDAPLKRQKLGQEE 123

Query: 183 APVQPTKRVDV 215
              Q ++++DV
Sbjct: 124 GIDQSSRQLDV 134


>ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|222850432|gb|EEE87979.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/73 (56%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   NDSRKPSTNASGGKLAFSLKQKSKLVAPPVKLXXXXXXXXXXG--YSSGNGSTKRQKVGQ 176
           ND+ K S  AS GKLAFSLKQKSKLVAP VKL              +SG  S KRQK+GQ
Sbjct: 68  NDASKTSQTASSGKLAFSLKQKSKLVAPAVKLGEDDEDEDEADAVNTSGGVSAKRQKLGQ 127

Query: 177 SDAPVQPTKRVDV 215
            DA  Q  KR+DV
Sbjct: 128 LDASEQSLKRLDV 140


>ref|XP_002298445.1| predicted protein [Populus trichocarpa] gi|222845703|gb|EEE83250.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   NDSRKPSTNASGGKLAFSLKQKSKLVAPPVKLXXXXXXXXXXG--YSSGNGSTKRQKVGQ 176
           ND RK    ASGGKLAFSLKQKSKL+AP VKL              +SG+ S KRQK+GQ
Sbjct: 68  NDGRKTPPTASGGKLAFSLKQKSKLMAPAVKLGEDEEDEDEVDAVNASGDVSAKRQKLGQ 127

Query: 177 SDAPVQPTKRVDV 215
            D   Q ++R+DV
Sbjct: 128 LDTSEQSSRRLDV 140


>ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like [Glycine max]
          Length = 436

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3   NDSRKPSTNASGGKLAFSLKQKSKLVAPPVKL-XXXXXXXXXXGYSSGNGSTKRQKVGQS 179
           ND+RK S   S GKLAFSLKQKSKLV PPVKL           GY S +   KRQK+GQ 
Sbjct: 64  NDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGYVSNDAPLKRQKLGQE 123

Query: 180 DAPVQPTKRVDV 215
           +   Q ++++DV
Sbjct: 124 EGIDQSSRQLDV 135


Top