BLASTX nr result

ID: Angelica22_contig00015576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015576
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567194.1| GRF1-interacting factor 3 [Arabidopsis thaliana...    67   1e-09
gb|AAB62864.1| contains region of similarity to SYT [Arabidopsis...    67   1e-09
ref|XP_004138447.1| PREDICTED: GRF1-interacting factor 3-like [C...    67   2e-09
ref|XP_002892085.1| hypothetical protein ARALYDRAFT_887341 [Arab...    67   2e-09
ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana...    66   3e-09

>ref|NP_567194.1| GRF1-interacting factor 3 [Arabidopsis thaliana]
           gi|75163154|sp|Q93VH6.1|GIF3_ARATH RecName:
           Full=GRF1-interacting factor 3; Short=AtGIF3; AltName:
           Full=Transcription coactivator GIF3
           gi|14190377|gb|AAK55669.1|AF378866_1
           AT4g00850/A_TM018A10_22 [Arabidopsis thaliana]
           gi|15450537|gb|AAK96446.1| AT4g00850/A_TM018A10_22
           [Arabidopsis thaliana] gi|21539894|gb|AAM52883.1|
           GRF1-interacting factor 3 [Arabidopsis thaliana]
           gi|332656545|gb|AEE81945.1| GRF1-interacting factor 3
           [Arabidopsis thaliana]
          Length = 223

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/81 (50%), Positives = 47/81 (58%)
 Frame = +3

Query: 51  TKLVTTEQIQKYLEENKNLILAILEHQNQGKVAECNQXXXXXXXXXXXXXXXXXXXXXXX 230
           T  +TTEQIQKYL+ENK LI+AILE+QN GK+AEC                         
Sbjct: 18  TNNITTEQIQKYLDENKKLIMAILENQNLGKLAEC------------------------- 52

Query: 231 XXXQLQAVLQKNLMNLAAIAD 293
              Q QA+LQKNLM LAAIAD
Sbjct: 53  --AQYQALLQKNLMYLAAIAD 71


>gb|AAB62864.1| contains region of similarity to SYT [Arabidopsis thaliana]
           gi|7267424|emb|CAB80894.1| AT4g00850 [Arabidopsis
           thaliana]
          Length = 230

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/81 (50%), Positives = 47/81 (58%)
 Frame = +3

Query: 51  TKLVTTEQIQKYLEENKNLILAILEHQNQGKVAECNQXXXXXXXXXXXXXXXXXXXXXXX 230
           T  +TTEQIQKYL+ENK LI+AILE+QN GK+AEC                         
Sbjct: 18  TNNITTEQIQKYLDENKKLIMAILENQNLGKLAEC------------------------- 52

Query: 231 XXXQLQAVLQKNLMNLAAIAD 293
              Q QA+LQKNLM LAAIAD
Sbjct: 53  --AQYQALLQKNLMYLAAIAD 71


>ref|XP_004138447.1| PREDICTED: GRF1-interacting factor 3-like [Cucumis sativus]
           gi|449495293|ref|XP_004159791.1| PREDICTED:
           GRF1-interacting factor 3-like [Cucumis sativus]
          Length = 217

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/111 (42%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
 Frame = +3

Query: 60  VTTEQIQKYLEENKNLILAILEHQNQGKVAECNQXXXXXXXXXXXXXXXXXXXXXXXXXX 239
           +TTEQIQKYL+ENK LILAIL++QN GK+AEC                            
Sbjct: 19  ITTEQIQKYLDENKKLILAILDNQNLGKLAEC---------------------------A 51

Query: 240 QLQAVLQKNLMNLAAIADXXXXXXXXXXXXXXXXXXXXN--YMQPPQGAMM 386
           Q QA LQKNLM LAAIAD                       YMQ PQ A+M
Sbjct: 52  QYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIM 102


>ref|XP_002892085.1| hypothetical protein ARALYDRAFT_887341 [Arabidopsis lyrata subsp.
           lyrata] gi|297337927|gb|EFH68344.1| hypothetical protein
           ARALYDRAFT_887341 [Arabidopsis lyrata subsp. lyrata]
          Length = 224

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/81 (49%), Positives = 47/81 (58%)
 Frame = +3

Query: 51  TKLVTTEQIQKYLEENKNLILAILEHQNQGKVAECNQXXXXXXXXXXXXXXXXXXXXXXX 230
           T  +TTEQIQKYL+ENK LI+AI+E+QN GK+AEC                         
Sbjct: 17  TNNITTEQIQKYLDENKKLIMAIMENQNLGKLAEC------------------------- 51

Query: 231 XXXQLQAVLQKNLMNLAAIAD 293
              Q QA+LQKNLM LAAIAD
Sbjct: 52  --AQYQALLQKNLMYLAAIAD 70


>ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana]
           gi|75192332|sp|Q9MAL9.1|GIF2_ARATH RecName:
           Full=GRF1-interacting factor 2; Short=AtGIF2; AltName:
           Full=Transcription coactivator GIF2
           gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15
           [Arabidopsis thaliana]
           gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1
           [Arabidopsis thaliana] gi|20857112|gb|AAM26700.1|
           At1g01160/F6F3_1 [Arabidopsis thaliana]
           gi|21539892|gb|AAM52882.1| GRF1-interacting factor 2
           [Arabidopsis thaliana] gi|332189126|gb|AEE27247.1|
           GRF1-interacting factor 2 [Arabidopsis thaliana]
          Length = 195

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/78 (50%), Positives = 46/78 (58%)
 Frame = +3

Query: 60  VTTEQIQKYLEENKNLILAILEHQNQGKVAECNQXXXXXXXXXXXXXXXXXXXXXXXXXX 239
           +TTEQIQKYL+ENK LI+AI+E+QN GK+AEC                            
Sbjct: 22  ITTEQIQKYLDENKKLIMAIMENQNLGKLAEC---------------------------A 54

Query: 240 QLQAVLQKNLMNLAAIAD 293
           Q QA+LQKNLM LAAIAD
Sbjct: 55  QYQALLQKNLMYLAAIAD 72


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