BLASTX nr result

ID: Angelica22_contig00015546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015546
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   254   3e-65
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   253   7e-65
ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi...   253   9e-65
ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi...   253   9e-65
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   252   2e-64

>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi|355491412|gb|AES72615.1|
            RNA-binding protein [Medicago truncatula]
          Length = 380

 Score =  254 bits (649), Expect = 3e-65
 Identities = 131/213 (61%), Positives = 147/213 (69%), Gaps = 8/213 (3%)
 Frame = -2

Query: 1142 CSVENILYCL*LKMSSRFSRTIYVGNLPLDIRESEIDDLFYKYGRIVDIELKIPSRPPCF 963
            CS+   +  L   MSSRFSRTIYVGNLP DIRESEI+DLFYKYGRI++IELK+P RPPC+
Sbjct: 95   CSLGLTVQFLQSNMSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCY 154

Query: 962  CFVEFXXXXXXXXXXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXRP 783
            CFVEF              GYNFDGCRLRVELAH                          
Sbjct: 155  CFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGG 214

Query: 782  T--------ISRHSEFRVIVRGLPSSASWQDLKDQMRKAGDVSFAEVFRDRDGAYGLVDY 627
                     +SRHSEFRVIVRGLPSSASWQDLKD MRKAGDV FAEV RD +G +GLVDY
Sbjct: 215  DSAGGGRFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDY 274

Query: 626  TNYEDMKYAIKKLDDTEFKNPWTKTYIRVSKFE 528
            TNY+DMKYAI+KLDDTEF+NPW ++YIRV K+E
Sbjct: 275  TNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 307


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  253 bits (646), Expect = 7e-65
 Identities = 128/192 (66%), Positives = 139/192 (72%)
 Frame = -2

Query: 1103 MSSRFSRTIYVGNLPLDIRESEIDDLFYKYGRIVDIELKIPSRPPCFCFVEFXXXXXXXX 924
            MS RFSRTIYVGNLP DIRESEI+DLFYKYGRI+D+ELKIP RPPC+CFVEF        
Sbjct: 1    MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 923  XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXRPTISRHSEFRVIVR 744
                  GYNFDGCRLRVELAH                           ISRHSEFRVIVR
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGGYGGGGGSGGRFG--ISRHSEFRVIVR 118

Query: 743  GLPSSASWQDLKDQMRKAGDVSFAEVFRDRDGAYGLVDYTNYEDMKYAIKKLDDTEFKNP 564
            GLPSSASWQDLKD MRKAGDV FAEV RD DG +G+VDYTN+EDMKYAI+KLDDTEF+NP
Sbjct: 119  GLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNP 178

Query: 563  WTKTYIRVSKFE 528
            W + YIRV + E
Sbjct: 179  WARAYIRVKQHE 190


>ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi|355491414|gb|AES72617.1|
            RNA-binding protein [Medicago truncatula]
          Length = 273

 Score =  253 bits (645), Expect = 9e-65
 Identities = 128/200 (64%), Positives = 142/200 (71%), Gaps = 8/200 (4%)
 Frame = -2

Query: 1103 MSSRFSRTIYVGNLPLDIRESEIDDLFYKYGRIVDIELKIPSRPPCFCFVEFXXXXXXXX 924
            MSSRFSRTIYVGNLP DIRESEI+DLFYKYGRI++IELK+P RPPC+CFVEF        
Sbjct: 1    MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60

Query: 923  XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXRPT--------ISRH 768
                  GYNFDGCRLRVELAH                                   +SRH
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120

Query: 767  SEFRVIVRGLPSSASWQDLKDQMRKAGDVSFAEVFRDRDGAYGLVDYTNYEDMKYAIKKL 588
            SEFRVIVRGLPSSASWQDLKD MRKAGDV FAEV RD +G +GLVDYTNY+DMKYAI+KL
Sbjct: 121  SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 180

Query: 587  DDTEFKNPWTKTYIRVSKFE 528
            DDTEF+NPW ++YIRV K+E
Sbjct: 181  DDTEFRNPWARSYIRVRKYE 200


>ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi|355491413|gb|AES72616.1|
            RNA-binding protein [Medicago truncatula]
          Length = 272

 Score =  253 bits (645), Expect = 9e-65
 Identities = 128/200 (64%), Positives = 142/200 (71%), Gaps = 8/200 (4%)
 Frame = -2

Query: 1103 MSSRFSRTIYVGNLPLDIRESEIDDLFYKYGRIVDIELKIPSRPPCFCFVEFXXXXXXXX 924
            MSSRFSRTIYVGNLP DIRESEI+DLFYKYGRI++IELK+P RPPC+CFVEF        
Sbjct: 1    MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60

Query: 923  XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXRPT--------ISRH 768
                  GYNFDGCRLRVELAH                                   +SRH
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120

Query: 767  SEFRVIVRGLPSSASWQDLKDQMRKAGDVSFAEVFRDRDGAYGLVDYTNYEDMKYAIKKL 588
            SEFRVIVRGLPSSASWQDLKD MRKAGDV FAEV RD +G +GLVDYTNY+DMKYAI+KL
Sbjct: 121  SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 180

Query: 587  DDTEFKNPWTKTYIRVSKFE 528
            DDTEF+NPW ++YIRV K+E
Sbjct: 181  DDTEFRNPWARSYIRVRKYE 200


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  252 bits (643), Expect = 2e-64
 Identities = 128/199 (64%), Positives = 140/199 (70%), Gaps = 7/199 (3%)
 Frame = -2

Query: 1103 MSSRFSRTIYVGNLPLDIRESEIDDLFYKYGRIVDIELKIPSRPPCFCFVEFXXXXXXXX 924
            MS RFSRTIYVGNLP DIRESEI+DLFYKYGRI+DIELK+P RPPC+CFVEF        
Sbjct: 1    MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 923  XXXXXXGYNFDGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXRPT-------ISRHS 765
                  GYNFDGCRLRVELAH                                  ISRHS
Sbjct: 61   AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHS 120

Query: 764  EFRVIVRGLPSSASWQDLKDQMRKAGDVSFAEVFRDRDGAYGLVDYTNYEDMKYAIKKLD 585
            EFRVIVRGLPSSASWQDLKD MRKAGDV FAEV RD +G +G+VDYTNY+DMKYAI+KLD
Sbjct: 121  EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLD 180

Query: 584  DTEFKNPWTKTYIRVSKFE 528
            DTEF+NPW + YIRV K+E
Sbjct: 181  DTEFRNPWARAYIRVRKYE 199


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