BLASTX nr result

ID: Angelica22_contig00015509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015509
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533105.1| cold-inducible RNA binding protein, putative...   134   9e-30
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   129   4e-28
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi...   128   6e-28
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....   126   2e-27
ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei...   126   2e-27

>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score =  134 bits (337), Expect = 9e-30
 Identities = 67/89 (75%), Positives = 77/89 (86%)
 Frame = +2

Query: 56  MAKRLSSQLFVSRLSFFTTNQELKKLFSPFGSVTEARLVMDENTQRPKGFGFVTFDSETE 235
           MA RL SQLFV RLS +TTNQ+L+KLFSPFG V EARLV+D  TQ+PKGFGFVTFDSE++
Sbjct: 1   MAIRLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQ 60

Query: 236 AQNALKAMNGRIVDGRLIFVEMAKTARPG 322
           AQ ALKAMNGRIVDGRL+FVE+AK+   G
Sbjct: 61  AQKALKAMNGRIVDGRLLFVEVAKSINSG 89


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  129 bits (323), Expect = 4e-28
 Identities = 62/88 (70%), Positives = 76/88 (86%)
 Frame = +2

Query: 59  AKRLSSQLFVSRLSFFTTNQELKKLFSPFGSVTEARLVMDENTQRPKGFGFVTFDSETEA 238
           A+R SS++FV+RLS +TTN+EL ++FSPFG VT+ARL+ D  TQRPKGFGFV F+SE +A
Sbjct: 20  ARRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDA 79

Query: 239 QNALKAMNGRIVDGRLIFVEMAKTARPG 322
           + ALKAMNGRIV GRLIFVE+AKT RPG
Sbjct: 80  EKALKAMNGRIVRGRLIFVEIAKTTRPG 107


>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7630030|emb|CAB88326.1| RNA binding protein-like
           [Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
           At3g46020 [Arabidopsis thaliana]
           gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
           thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 102

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/90 (67%), Positives = 77/90 (85%)
 Frame = +2

Query: 56  MAKRLSSQLFVSRLSFFTTNQELKKLFSPFGSVTEARLVMDENTQRPKGFGFVTFDSETE 235
           MAKR+S+QLFVSRLS +TT+Q L++LFSPFG + EARL+ D  TQRPKGFGF+TFDSE +
Sbjct: 1   MAKRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDD 60

Query: 236 AQNALKAMNGRIVDGRLIFVEMAKTARPGR 325
           A+ ALK+++G+IVDGRLIFVE+AK A   R
Sbjct: 61  ARKALKSLDGKIVDGRLIFVEVAKNAEEVR 90


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/84 (70%), Positives = 75/84 (89%)
 Frame = +2

Query: 56  MAKRLSSQLFVSRLSFFTTNQELKKLFSPFGSVTEARLVMDENTQRPKGFGFVTFDSETE 235
           MAKR ++QLFVSRLS +TT+Q L++LF+PFG + EARL+ D+ TQRPKGFGF+TF+SE +
Sbjct: 1   MAKRFTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDD 60

Query: 236 AQNALKAMNGRIVDGRLIFVEMAK 307
           AQNALKA+NG+IV+GRLIFVE AK
Sbjct: 61  AQNALKALNGKIVNGRLIFVEAAK 84


>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
           sativus]
          Length = 95

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/89 (69%), Positives = 73/89 (82%)
 Frame = +2

Query: 56  MAKRLSSQLFVSRLSFFTTNQELKKLFSPFGSVTEARLVMDENTQRPKGFGFVTFDSETE 235
           MA RL S+LF+SRLS +TT + LK LFSPFGS++EARL+ D  T+RPKGFGFVTF S  E
Sbjct: 1   MANRLGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAE 60

Query: 236 AQNALKAMNGRIVDGRLIFVEMAKTARPG 322
           A+ ALKAM+GRIVDGRLIFVE AKT + G
Sbjct: 61  AKKALKAMDGRIVDGRLIFVEFAKTEKHG 89


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