BLASTX nr result

ID: Angelica22_contig00015021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00015021
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]               151   9e-35
ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   148   8e-34
ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea ma...   144   1e-32
ref|NP_001149883.1| spliceosomal protein [Zea mays] gi|194696844...   144   1e-32

>ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|222862970|gb|EEF00477.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  153 bits (386), Expect = 3e-35
 Identities = 85/131 (64%), Positives = 90/131 (68%)
 Frame = +3

Query: 60  QPAGTNGVRAETNGGPMGSRQGRPSAQEAAAPPNNILFIQNLPHETTDDMLQVLFKQYPG 239
           Q A  NG  AE+NGGP   RQG  SAQE   PPNNILFIQNLPHETT  MLQVLF+QYPG
Sbjct: 126 QSAPANGKPAESNGGPTSFRQGNQSAQETV-PPNNILFIQNLPHETTSMMLQVLFQQYPG 184

Query: 240 FREVRMIAAKPGIAFXXXXXXXXXXXXXXXXXPGIAFVEFEDDNQSLVAMEALQGFKITP 419
           FREVRMI AK                      PGIAFVEFEDD QS +AM+ALQGFKITP
Sbjct: 185 FREVRMIEAK----------------------PGIAFVEFEDDVQSSMAMQALQGFKITP 222

Query: 420 QNPMGISYAKK 452
           QNPM I+YAKK
Sbjct: 223 QNPMAITYAKK 233


>gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
          Length = 231

 Score =  151 bits (382), Expect = 9e-35
 Identities = 84/132 (63%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = +3

Query: 60  QPAGTNGVRAETNGGPMG-SRQGRPSAQEAAAPPNNILFIQNLPHETTDDMLQVLFKQYP 236
           Q    NG R ++NGGP   SRQG+PSAQ+ A P NNILFIQNLPHETT  ML+VLFKQYP
Sbjct: 123 QTGAANGPRTDSNGGPAAASRQGKPSAQDVAEP-NNILFIQNLPHETTSMMLEVLFKQYP 181

Query: 237 GFREVRMIAAKPGIAFXXXXXXXXXXXXXXXXXPGIAFVEFEDDNQSLVAMEALQGFKIT 416
           GFREVRMI AK                      PGIAFVEF+DD QS VAM+ALQGFKIT
Sbjct: 182 GFREVRMIEAK----------------------PGIAFVEFDDDVQSSVAMQALQGFKIT 219

Query: 417 PQNPMGISYAKK 452
           PQNPM I+YAKK
Sbjct: 220 PQNPMAITYAKK 231


>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  148 bits (374), Expect = 8e-34
 Identities = 83/132 (62%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = +3

Query: 60  QPAGTNGVRAETNGGPMGS-RQGRPSAQEAAAPPNNILFIQNLPHETTDDMLQVLFKQYP 236
           Q    NG  AETNGGP    RQG   A+E  A PNNILFIQNLPH+TT  MLQVLF+QYP
Sbjct: 125 QSGNANGRNAETNGGPTPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLFQQYP 184

Query: 237 GFREVRMIAAKPGIAFXXXXXXXXXXXXXXXXXPGIAFVEFEDDNQSLVAMEALQGFKIT 416
           GFREVRMI AK                      PGIAFVEFEDD QS +AMEALQGFKIT
Sbjct: 185 GFREVRMIEAK----------------------PGIAFVEFEDDVQSSMAMEALQGFKIT 222

Query: 417 PQNPMGISYAKK 452
           PQNPM I+YAKK
Sbjct: 223 PQNPMAIAYAKK 234


>ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea mays]
           gi|224029017|gb|ACN33584.1| unknown [Zea mays]
           gi|414866361|tpg|DAA44918.1| TPA: hypothetical protein
           ZEAMMB73_448604 [Zea mays]
          Length = 233

 Score =  144 bits (363), Expect = 1e-32
 Identities = 81/133 (60%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = +3

Query: 57  SQPAGTNGVRAETNG-GPMGSRQGRPSAQEAAAPPNNILFIQNLPHETTDDMLQVLFKQY 233
           +Q AG N   A++NG G   SR G+ S QE  APPNNILFIQNLP +TT  MLQ+LF+QY
Sbjct: 124 AQQAGLNAAAAQSNGTGYQASRLGKAS-QEPPAPPNNILFIQNLPDQTTSMMLQILFQQY 182

Query: 234 PGFREVRMIAAKPGIAFXXXXXXXXXXXXXXXXXPGIAFVEFEDDNQSLVAMEALQGFKI 413
           PGFREVRMI AK                      PGIAFVEFEDD QS+VAM+ALQGFKI
Sbjct: 183 PGFREVRMIEAK----------------------PGIAFVEFEDDGQSMVAMQALQGFKI 220

Query: 414 TPQNPMGISYAKK 452
           TP+NPM ISYAKK
Sbjct: 221 TPENPMAISYAKK 233


>ref|NP_001149883.1| spliceosomal protein [Zea mays] gi|194696844|gb|ACF82506.1| unknown
           [Zea mays] gi|195635261|gb|ACG37099.1| spliceosomal
           protein [Zea mays] gi|195659375|gb|ACG49155.1|
           spliceosomal protein [Zea mays]
           gi|413956009|gb|AFW88658.1| Spliceosomal protein [Zea
           mays]
          Length = 233

 Score =  144 bits (363), Expect = 1e-32
 Identities = 81/133 (60%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = +3

Query: 57  SQPAGTNGVRAETNG-GPMGSRQGRPSAQEAAAPPNNILFIQNLPHETTDDMLQVLFKQY 233
           +Q AG N   A++NG G   SR G+ S QE  APPNNILFIQNLP +TT  MLQ+LF+QY
Sbjct: 124 AQQAGPNAAAAQSNGTGYQASRLGKAS-QEPPAPPNNILFIQNLPDQTTSMMLQILFQQY 182

Query: 234 PGFREVRMIAAKPGIAFXXXXXXXXXXXXXXXXXPGIAFVEFEDDNQSLVAMEALQGFKI 413
           PGFREVRMI AK                      PGIAFVEFEDD QS+VAM+ALQGFKI
Sbjct: 183 PGFREVRMIEAK----------------------PGIAFVEFEDDGQSMVAMQALQGFKI 220

Query: 414 TPQNPMGISYAKK 452
           TP+NPM ISYAKK
Sbjct: 221 TPENPMAISYAKK 233


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