BLASTX nr result

ID: Angelica22_contig00014686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00014686
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]              73   4e-11
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...    72   1e-10
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni...    72   1e-10
gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 190...    72   1e-10
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops...    72   1e-10

>gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
          Length = 532

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = -1

Query: 113 SGDAVVNVYINHEKKFAFVEMRSVEKASNAMALDGII 3
           SGDAVVNVYINHEKKFAFVEMRSVE+ASNAMALDG+I
Sbjct: 232 SGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVI 268


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -1

Query: 110 GDAVVNVYINHEKKFAFVEMRSVEKASNAMALDGII 3
           GDAVVNVYINHEKKFAFVEMRSVE+ASNAMALDGII
Sbjct: 289 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 324


>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -1

Query: 110 GDAVVNVYINHEKKFAFVEMRSVEKASNAMALDGII 3
           GDAVVNVYINHEKKFAFVEMRSVE+ASNAMALDGII
Sbjct: 289 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 324


>gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
           thaliana]
          Length = 568

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -1

Query: 110 GDAVVNVYINHEKKFAFVEMRSVEKASNAMALDGII 3
           GDAVVNVYINHEKKFAFVEMRSVE+ASNAMALDGII
Sbjct: 269 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 304


>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
           gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
           Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|332195625|gb|AEE33746.1| Splicing factor
           U2af large subunit B [Arabidopsis thaliana]
          Length = 589

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -1

Query: 110 GDAVVNVYINHEKKFAFVEMRSVEKASNAMALDGII 3
           GDAVVNVYINHEKKFAFVEMRSVE+ASNAMALDGII
Sbjct: 290 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 325


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