BLASTX nr result

ID: Angelica22_contig00014421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00014421
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit...   138   4e-31
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu...   127   9e-28
ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_003622361.1| PHD finger protein [Medicago truncatula] gi|...   124   1e-26
ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
           gi|296084820|emb|CBI27702.3| unnamed protein product
           [Vitis vinifera]
          Length = 692

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/115 (61%), Positives = 83/115 (72%)
 Frame = -2

Query: 345 MVVSGRPLKRMKRRVTADINDFFTFPAGGSPVDGPFRNSVKSFVSKYAXXXXXXXXXPQL 166
           MVV+GRP+KRMK RVTAD+ DF  FPA G   +GPFR +VKSF++K+A         P L
Sbjct: 1   MVVNGRPMKRMKMRVTADLYDFLAFPAAGDFAEGPFRTTVKSFLTKHALLPPPGSLLPHL 60

Query: 165 TTRQIVFRVGDSAESNSDGDDLATVCLDVVEENVARSRSVYCDQCRVVGWSGNPV 1
            T QI FRVG++     +    A VCLDVVEE+VARSRSVYCDQCRVVGWSGNPV
Sbjct: 61  LTWQIWFRVGEAVVDGGESSP-AVVCLDVVEEDVARSRSVYCDQCRVVGWSGNPV 114


>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
           gi|223542200|gb|EEF43744.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 677

 Score =  127 bits (319), Expect = 9e-28
 Identities = 68/115 (59%), Positives = 80/115 (69%)
 Frame = -2

Query: 345 MVVSGRPLKRMKRRVTADINDFFTFPAGGSPVDGPFRNSVKSFVSKYAXXXXXXXXXPQL 166
           MVV+ RPLKRMKRRVTAD+ DF TFP+G     GPFR ++KSF+ ++A         P L
Sbjct: 1   MVVNCRPLKRMKRRVTADLCDFLTFPSGFESPRGPFRTNIKSFLMEHALFPPPSSLFPHL 60

Query: 165 TTRQIVFRVGDSAESNSDGDDLATVCLDVVEENVARSRSVYCDQCRVVGWSGNPV 1
            T QI FRVGD  +        A V LD+VEE+VARSRSVYCDQCRVVGWSG+PV
Sbjct: 61  MTWQISFRVGDLTDGLDSSP--AVVSLDIVEEDVARSRSVYCDQCRVVGWSGHPV 113


>ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  126 bits (316), Expect = 2e-27
 Identities = 70/129 (54%), Positives = 84/129 (65%), Gaps = 14/129 (10%)
 Frame = -2

Query: 345 MVVSGRPLKRMKRRVTADINDFFTFPAGGS--------------PVDGPFRNSVKSFVSK 208
           MVV+GRP+KRMKRRVTAD+ +F TFPA  S              P  GPFR++V+SF+++
Sbjct: 1   MVVNGRPIKRMKRRVTADLYNFLTFPASSSSSSSSSSSSSSSLPPPRGPFRSNVRSFLTE 60

Query: 207 YAXXXXXXXXXPQLTTRQIVFRVGDSAESNSDGDDLATVCLDVVEENVARSRSVYCDQCR 28
           +A         P L T QI FRVGD  ES       A V LDVVEE+VARSR+VYCDQCR
Sbjct: 61  HALLPPPSSLFPHLLTWQISFRVGDLVESGGGEAGSAVVSLDVVEEDVARSRTVYCDQCR 120

Query: 27  VVGWSGNPV 1
           VVGWS +PV
Sbjct: 121 VVGWSEHPV 129


>ref|XP_003622361.1| PHD finger protein [Medicago truncatula]
           gi|355497376|gb|AES78579.1| PHD finger protein [Medicago
           truncatula]
          Length = 797

 Score =  124 bits (310), Expect = 1e-26
 Identities = 72/121 (59%), Positives = 83/121 (68%), Gaps = 6/121 (4%)
 Frame = -2

Query: 345 MVVSG-RPLKRMKRRVTADINDFFTFP-----AGGSPVDGPFRNSVKSFVSKYAXXXXXX 184
           MVVSG + LKRMKRRVTAD +DFF+FP     A  S   GPFR++V SF++KYA      
Sbjct: 1   MVVSGGKSLKRMKRRVTADYHDFFSFPSPSLAASESFSGGPFRSNVHSFLTKYALLPPPS 60

Query: 183 XXXPQLTTRQIVFRVGDSAESNSDGDDLATVCLDVVEENVARSRSVYCDQCRVVGWSGNP 4
              P L T QI+FRVG+  E    G   A +CLDVVEE+VARSRSVYCDQCRV G SGNP
Sbjct: 61  ALFPHLLTWQILFRVGEITEGGESGP--AVICLDVVEEDVARSRSVYCDQCRVFGCSGNP 118

Query: 3   V 1
           V
Sbjct: 119 V 119


>ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|222862167|gb|EEE99673.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/126 (51%), Positives = 82/126 (65%), Gaps = 11/126 (8%)
 Frame = -2

Query: 345 MVVSGRPLKRMKRRVTADINDFFTFPAGGS-----------PVDGPFRNSVKSFVSKYAX 199
           MVV+GRP+KRMKRRVTAD+ +F +FP+  S           P  GPFR++++SF++++A 
Sbjct: 1   MVVNGRPIKRMKRRVTADLYNFLSFPSSPSSSSSSSSSSPPPPRGPFRSNIRSFLTEHAL 60

Query: 198 XXXXXXXXPQLTTRQIVFRVGDSAESNSDGDDLATVCLDVVEENVARSRSVYCDQCRVVG 19
                   P L T QI F+VGD             V LDVVEE+VARSRSVYCDQCRVVG
Sbjct: 61  LPPPSSLFPHLLTWQISFQVGDLVGCGGAEAGGGVVSLDVVEEDVARSRSVYCDQCRVVG 120

Query: 18  WSGNPV 1
           WSG+PV
Sbjct: 121 WSGHPV 126


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