BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00014289
         (1769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   581   e-179
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   564   e-176
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              557   e-174
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   573   e-170
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   553   e-167

>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  581 bits (1497), Expect(2) = e-179
 Identities = 282/349 (80%), Positives = 312/349 (89%)
 Frame = +3

Query: 501  QIRHNEVMKTGARIYVPVSVAETRISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIV 680
            +I+HN++M+ GAR++V VSVAETRISKRF+ IP+GTLYPNADEI+YLQRLVKYKDSAIIV
Sbjct: 122  KIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIV 181

Query: 681  LNKPPRLPVKGNLPVHNSMDALASAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESIAH 860
            LNKPPRLPVKGNLP+HNSMDALA+AALSYD +EGPKLV RLDRESSG+ LMGRTKESI H
Sbjct: 182  LNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDH 241

Query: 861  LQWLFSGIYRGNSSHKAWNDACHATYQKYWVLVIGSPKEKEGLIRAPLTKVFLNDGKTER 1040
            LQWLFS + + NS  KAWNDAC ATYQ+YW LVIGSPKEKEGLIRAPL+KV LNDGKTER
Sbjct: 242  LQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTER 301

Query: 1041 VILAHGSGLEASQEAVTEYRVLGPMINGCSWMELRPLTSRKHQIRVHCAEALGTPIVGDY 1220
            V+LA  SGLEASQEA+TEYRVLGP INGCSW+ELRPLTSRKHQ+RVHCAEALGTPIVGDY
Sbjct: 302  VVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDY 361

Query: 1221 KYGWFTHCRWKQMPRVDIEPTTGKPYKMRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNV 1400
            KYGW  H RWKQMPRVDIEP +GKPYK+RRP GLDVQKGSVLSKVPLLH+HCRE VLPN+
Sbjct: 362  KYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNI 421

Query: 1401 AKFIELHKNTSETTQKSHDNYTKPDLLRFVASMPSHMKISWNLMSSYLV 1547
            AKF+ +    SE    + D   KPDLLRFVASMP+HMKISWNLMSSYLV
Sbjct: 422  AKFLAVLNEKSENIHPALD--AKPDLLRFVASMPTHMKISWNLMSSYLV 468



 Score = 76.3 bits (186), Expect(2) = e-179
 Identities = 57/123 (46%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
 Frame = +2

Query: 137 RAVRGLRFYSRISTPPPNCTPKSHTVVRVSPKTNIAQLGPPRKNEHKPRQLLTXXXXXXX 316
           R V   R YSRI+ PPP     ++ V+RVS   N+A LG P K+  KPRQLL+       
Sbjct: 9   RVVSQGRSYSRIAPPPP---AYANPVIRVS--NNVAHLGSP-KDGPKPRQLLSLPPFPGL 62

Query: 317 XXXXXX----RVTAISWMKFYFQEIDDLVIQSHFKKGLVHIDDDNRSDGLSLYKQGQMDH 484
                      VTAISW+K+YF EI D  IQSHF KGL HI+  N S   S+   GQM  
Sbjct: 63  PLPGRNSMASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSG--SIEYGGQMS- 119

Query: 485 LRK 493
           LRK
Sbjct: 120 LRK 122


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  564 bits (1454), Expect(2) = e-176
 Identities = 271/349 (77%), Positives = 307/349 (87%)
 Frame = +3

Query: 501  QIRHNEVMKTGARIYVPVSVAETRISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIV 680
            +I+ NEVM+ G RIYVPVSVAE RISKRF+ IP+GTL+PNADEIEYLQRLV YKD AI+V
Sbjct: 131  KIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILV 190

Query: 681  LNKPPRLPVKGNLPVHNSMDALASAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESIAH 860
            LNKPP++P+KGNLPVHNSMDALA+AAL++D EEGPKLVHRLDRESSG+ LMGRTKES+AH
Sbjct: 191  LNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAH 250

Query: 861  LQWLFSGIYRGNSSHKAWNDACHATYQKYWVLVIGSPKEKEGLIRAPLTKVFLNDGKTER 1040
            L WLFS I +  S  KAW+DAC AT Q+YW LVIGSPK+KEG+I APL+KV L+DGKTER
Sbjct: 251  LHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTER 310

Query: 1041 VILAHGSGLEASQEAVTEYRVLGPMINGCSWMELRPLTSRKHQIRVHCAEALGTPIVGDY 1220
            VILA+ SGLEASQEA+TEYRVLGPMINGCSW+EL P TSRKHQ+RVHCAEALGTPIVGDY
Sbjct: 311  VILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDY 370

Query: 1221 KYGWFTHCRWKQMPRVDIEPTTGKPYKMRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNV 1400
            KYGWF H RWKQMPRVD+EPTTGKPYKMRRP GLDVQKGSVLSKVPLLH+HCREL+LPN+
Sbjct: 371  KYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNI 430

Query: 1401 AKFIELHKNTSETTQKSHDNYTKPDLLRFVASMPSHMKISWNLMSSYLV 1547
            AKF+ +     +   +      KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 431  AKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479



 Score = 81.6 bits (200), Expect(2) = e-176
 Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
 Frame = +2

Query: 152 LRFYSRISTPPPNCTPKSHTVVRVSPKTNIAQLGPPRKNEHKPRQLLTXXXXXXXXXXXX 331
           +R YSRI+ P P     +  V+RVS   N+AQLG P++   KPRQLL+            
Sbjct: 16  VRHYSRIAPPRP---ASAAPVIRVS--NNVAQLGSPKEGP-KPRQLLSLPPFPAHPLPGK 69

Query: 332 X---------RVTAISWMKFYFQEIDDLVIQSHFKKGLVHIDDDNRSDGLSLYKQGQMDH 484
                      VTAISW+K+YF EI   V+QSHF KGLVH++  N  D  SL K+GQ+  
Sbjct: 70  SLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDS-SLEKEGQIKP 128

Query: 485 LRK 493
           LRK
Sbjct: 129 LRK 131


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  557 bits (1436), Expect(2) = e-174
 Identities = 269/351 (76%), Positives = 308/351 (87%), Gaps = 2/351 (0%)
 Frame = +3

Query: 501  QIRHNEVMKTGARIYVPVSVAETRISKRFNAIPTGTLYPNADEIEYLQRL--VKYKDSAI 674
            +I+ NEVM+ G RIYVPVSVAE RISKRF+ IP+GTL+PNADEIEYLQRL  +K++D AI
Sbjct: 131  KIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAI 190

Query: 675  IVLNKPPRLPVKGNLPVHNSMDALASAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESI 854
            +VLNKPP++P+KGNLPVHNSMDALA+AAL++D EEGPKLVHRLDRESSG+ LMGRTKES+
Sbjct: 191  LVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESV 250

Query: 855  AHLQWLFSGIYRGNSSHKAWNDACHATYQKYWVLVIGSPKEKEGLIRAPLTKVFLNDGKT 1034
            AHL WLFS I +  S  KAW+DAC AT Q+YW LVIGSPK+KEG+I APL+KV L+DGKT
Sbjct: 251  AHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKT 310

Query: 1035 ERVILAHGSGLEASQEAVTEYRVLGPMINGCSWMELRPLTSRKHQIRVHCAEALGTPIVG 1214
            ERVILA+ SGLEASQEA+TEYRVLGPMINGCSW+EL P TSRKHQ+RVHCAEALGTPIVG
Sbjct: 311  ERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVG 370

Query: 1215 DYKYGWFTHCRWKQMPRVDIEPTTGKPYKMRRPNGLDVQKGSVLSKVPLLHMHCRELVLP 1394
            DYKYGWF H RWKQMPRVD+EPTTGKPYKMRRP GLDVQKGSVLSKVPLLH+HCREL+LP
Sbjct: 371  DYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILP 430

Query: 1395 NVAKFIELHKNTSETTQKSHDNYTKPDLLRFVASMPSHMKISWNLMSSYLV 1547
            N+AKF+ +     +   +      KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 431  NIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481



 Score = 81.6 bits (200), Expect(2) = e-174
 Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
 Frame = +2

Query: 152 LRFYSRISTPPPNCTPKSHTVVRVSPKTNIAQLGPPRKNEHKPRQLLTXXXXXXXXXXXX 331
           +R YSRI+ P P     +  V+RVS   N+AQLG P++   KPRQLL+            
Sbjct: 16  VRHYSRIAPPRP---ASAAPVIRVS--NNVAQLGSPKEGP-KPRQLLSLPPFPAHPLPGK 69

Query: 332 X---------RVTAISWMKFYFQEIDDLVIQSHFKKGLVHIDDDNRSDGLSLYKQGQMDH 484
                      VTAISW+K+YF EI   V+QSHF KGLVH++  N  D  SL K+GQ+  
Sbjct: 70  SLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDS-SLEKEGQIKP 128

Query: 485 LRK 493
           LRK
Sbjct: 129 LRK 131


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
            max]
          Length = 554

 Score =  573 bits (1476), Expect(2) = e-170
 Identities = 275/349 (78%), Positives = 311/349 (89%)
 Frame = +3

Query: 501  QIRHNEVMKTGARIYVPVSVAETRISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIV 680
            +IR NEVMK GAR++VPVS+ ETRISKR++AIP+GTLYPNADEI+YLQRLV YKDSAIIV
Sbjct: 208  KIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIV 267

Query: 681  LNKPPRLPVKGNLPVHNSMDALASAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESIAH 860
            LNKPP+LPVKG+LPVHNSMDALA+AALSYD +EGPKLVHRLDRESSGI L+GRTK+S++H
Sbjct: 268  LNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSH 327

Query: 861  LQWLFSGIYRGNSSHKAWNDACHATYQKYWVLVIGSPKEKEGLIRAPLTKVFLNDGKTER 1040
            LQWLFS I    SS K WN+AC ATYQ+YW LVIG+PKEKEG+I APL+KV LNDGKTER
Sbjct: 328  LQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTER 387

Query: 1041 VILAHGSGLEASQEAVTEYRVLGPMINGCSWMELRPLTSRKHQIRVHCAEALGTPIVGDY 1220
            +ILAH S +E  QEAVTEYRVLGP INGCSW+ELRPLT RKHQ+RVHCAEALGTPIVGDY
Sbjct: 388  IILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDY 447

Query: 1221 KYGWFTHCRWKQMPRVDIEPTTGKPYKMRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNV 1400
            KYGWF H RWKQMPRVDIEPTTGKPYK+RRP GLDVQKGSVLSKVPLLH+HCRELVLPN+
Sbjct: 448  KYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNI 507

Query: 1401 AKFIELHKNTSETTQKSHDNYTKPDLLRFVASMPSHMKISWNLMSSYLV 1547
             KF+ +  N+SE  + S     +PD+LRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 508  VKFMHVLNNSSEELRTSLRE--QPDVLRFVATMPSHMRISWNLMSSYLV 554



 Score = 55.8 bits (133), Expect(2) = e-170
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
 Frame = +2

Query: 155 RFYSRISTPPPNCTPKSHTVVRVSPKTNIAQLGPPRKNEHKPRQLLTXXXXXXXXXXXXX 334
           R YSRI  P P        V+ VS   NIA+L  P++   KPRQLL+             
Sbjct: 97  RHYSRIQPPRPVSV---EPVISVS--NNIARLDAPKEGP-KPRQLLSLPPFPGHPLPDKS 150

Query: 335 R---------VTAISWMKFYFQEIDDLVIQSHFKKGLVHIDDDNRSDGLSLYKQGQMDHL 487
                     VTA++W+K+YF+     VI+SHF++GLV ++    +D  S  K+ QM  +
Sbjct: 151 SISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQME----ADDSSTQKEEQMKPM 206

Query: 488 RK*R 499
           RK R
Sbjct: 207 RKIR 210


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
            gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
            pseudourine synthase 3, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 3; AltName: Full=RNA-uridine
            isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
            At1g78910 [Arabidopsis thaliana]
            gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
            thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
            synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  553 bits (1426), Expect(2) = e-167
 Identities = 266/350 (76%), Positives = 308/350 (88%), Gaps = 1/350 (0%)
 Frame = +3

Query: 501  QIRHNEVMKTGARIYVPVSVAETRISKRFNAIPTGTLYPNADEIEYLQRLVKYKDSAIIV 680
            +I+HNEVM+ G +I++PVS+AE RISKR++ IP+GTLYPNADEI YLQRLV++KDSAIIV
Sbjct: 131  KIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIV 190

Query: 681  LNKPPRLPVKGNLPVHNSMDALASAALSYDNEEGPKLVHRLDRESSGIHLMGRTKESIAH 860
            LNKPP+LPVKGN+P+HNSMDALA+AALS+ N+EGP+LVHRLDRE+SG+ +MGRTKESI +
Sbjct: 191  LNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDY 250

Query: 861  LQWLFSGIYRGNSSHKAWNDACHATYQKYWVLVIGSPKEKEGLIRAPLTKVFLNDGKTER 1040
            L  +FS     NSS KAWN AC A YQ+YW LVIGSPKEKEGLI APL+KV L+DGKT+R
Sbjct: 251  LHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDR 310

Query: 1041 VILAHGSGLEASQEAVTEYRVLGPMINGCSWMELRPLTSRKHQIRVHCAEALGTPIVGDY 1220
            V+LA GSG EASQ+A+TEY+VLGP INGCSW+ELRP+TSRKHQ+RVHCAEALGTPIVGDY
Sbjct: 311  VVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDY 370

Query: 1221 KYGWFTHCRWKQMPRVDIEPTTGKPYKMRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNV 1400
            KYGWF H RWKQMP+VDIEPTTGKPYK+RRP GLDVQKGSVLSKVPLLH+HCRE+VLPN+
Sbjct: 371  KYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNI 430

Query: 1401 AKFIELHKNTSETTQKSHDN-YTKPDLLRFVASMPSHMKISWNLMSSYLV 1547
            AKF  LH    + T+  H     KPDLLRFVASMPSHMKISWNLMSSYLV
Sbjct: 431  AKF--LHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478



 Score = 63.2 bits (152), Expect(2) = e-167
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
 Frame = +2

Query: 152 LRFYSRISTPPPNCTPKSHTVVRVSPKTNIAQLGPPRKNEHKPRQLLTXXXXXXXXXXXX 331
           +R YSR++ PP +       V+RV+   N+A LGPP++    PRQL++            
Sbjct: 17  IRRYSRVAPPPSS-------VIRVT--NNVAHLGPPKQGP-LPRQLISLPPFPGHPLPGK 66

Query: 332 X------------RVTAISWMKFYFQEIDDLVIQSHFKKGLVHIDDDNRSD 448
                         VTAISW+K+YF+EI D  IQ+HF KGLV ++   R D
Sbjct: 67  NAGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRD 117