BLASTX nr result

ID: Angelica22_contig00014253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00014253
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]   109   2e-22
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi...   109   3e-22
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2...   103   1e-20
ref|XP_002302948.1| high mobility group family [Populus trichoca...   102   4e-20
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   100   9e-20

>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/125 (49%), Positives = 80/125 (64%), Gaps = 8/125 (6%)
 Frame = -1

Query: 354 ELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGELVMFKGNY 175
           E+I+ AIEA++DK+G+N ++ISK+IES YG+LPAAHSTLL+HHLN+MKQ+G+LVM K NY
Sbjct: 21  EMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLLAHHLNKMKQSGDLVMVKNNY 80

Query: 174 LKXXXXXXXXXXXXXXPKEKI--SAAVDAASPRKRGRPAK------VVSSGGDAPATSPR 19
           +K              PK K+        A PR RGRP K       VS    A + S +
Sbjct: 81  MKPDPNAPPRRGRGRPPKPKVPLPPGTVLAPPRPRGRPPKPRDPFAPVSPPKKASSGSGK 140

Query: 18  PRGRP 4
           PRGRP
Sbjct: 141 PRGRP 145


>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
           gi|297737664|emb|CBI26865.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 8/125 (6%)
 Frame = -1

Query: 354 ELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGELVMFKGNY 175
           E+I+ AIEA++DK G+N ++ISK+IES YG+LPAAHSTLL+HHLN+MKQ+G+LVM K NY
Sbjct: 21  EMIMAAIEALNDKGGSNKSSISKYIESTYGDLPAAHSTLLAHHLNKMKQSGDLVMVKNNY 80

Query: 174 LKXXXXXXXXXXXXXXPKEKI--SAAVDAASPRKRGRPAK------VVSSGGDAPATSPR 19
           +K              PK K+        A PR RGRP K       VS    A + S +
Sbjct: 81  MKPDPNAPPRRGRGRPPKPKVPLPPGTVLAPPRPRGRPPKPRDPFAPVSPPKKASSGSGK 140

Query: 18  PRGRP 4
           PRGRP
Sbjct: 141 PRGRP 145


>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
           Histone H1, putative [Ricinus communis]
          Length = 199

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/127 (48%), Positives = 79/127 (62%), Gaps = 10/127 (7%)
 Frame = -1

Query: 354 ELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGELVMFKGNY 175
           E+IL AIE+++DKNG+N +AISK +E+ Y +LP AH+TLLSHHLN+MKQ+G+LV+ K NY
Sbjct: 33  EMILAAIESLNDKNGSNKSAISKQMETTYPDLPPAHTTLLSHHLNKMKQSGQLVLVKNNY 92

Query: 174 LKXXXXXXXXXXXXXXPKEKISAAVDA--ASPRKRGRPAK------VVSSGGDAPATSP- 22
           +K              PK K      A  A PR RGRP K       V+S     AT+P 
Sbjct: 93  MKPDPNAPPKRGRGRPPKPKAPLPPGAVIAPPRPRGRPPKPRDPFAPVASPKKKIATAPT 152

Query: 21  -RPRGRP 4
            RPRGRP
Sbjct: 153 GRPRGRP 159


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
 Frame = -1

Query: 354 ELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGELVMFKGNY 175
           E+IL AIEA+++ NG N  +ISK+IES YG+LPA H+ LLSHHLNRMK TGELV +K NY
Sbjct: 17  EMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHLNRMKDTGELVFWKNNY 76

Query: 174 LKXXXXXXXXXXXXXXPKEK--ISAAVDAASPRKRGRPAKVVSSGGD------APATSPR 19
           +K              PK K  +S   D    R RGRP K  ++         A   S +
Sbjct: 77  MKPDPNAPPRRGRGRPPKPKDPLSPGSDLPPARPRGRPPKDPNAPPKPVKPKAATGRSGK 136

Query: 18  PRGRPK 1
           PRGRP+
Sbjct: 137 PRGRPR 142


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  100 bits (250), Expect = 9e-20
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 7/125 (5%)
 Frame = -1

Query: 354 ELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGELVMFKGNY 175
           E+++ A++A+++ +G+N +AISK+IES YGELP  H+TLL+HHLN+MK +GELV  K NY
Sbjct: 17  EMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHLNKMKDSGELVFLKNNY 76

Query: 174 LKXXXXXXXXXXXXXXPKEKI--SAAVDAASPRKRGRPAKVVSSGGDAPAT-----SPRP 16
           +K              PK K+        + PR RGRP K  ++   +P T     S RP
Sbjct: 77  MKPDPNAPPKRGRGRPPKPKVPLPPGTVLSPPRPRGRPPKDPNAPPKSPKTKVSTGSGRP 136

Query: 15  RGRPK 1
           RGRPK
Sbjct: 137 RGRPK 141


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