BLASTX nr result

ID: Angelica22_contig00014229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00014229
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...    88   2e-15
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...    81   2e-13
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ...    77   2e-12
gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indi...    77   3e-12
ref|XP_002321147.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12

>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 43/73 (58%), Positives = 49/73 (67%)
 Frame = +1

Query: 271 VRIMYDKDTGRSRGFGFVYFXXXXXXXXXXXXXXXXXYLGRPLRISYALDKVRGGPVVVP 450
           VRIMYDKD+GRSRGFGFVYF                 +LGRPLR+SYAL+KVRGGP+VVP
Sbjct: 67  VRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYALEKVRGGPIVVP 126

Query: 451 RLANSGIANARKN 489
           R  N G  N  +N
Sbjct: 127 RRLNGGDDNNSRN 139


>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 42/73 (57%), Positives = 51/73 (69%)
 Frame = +1

Query: 271 VRIMYDKDTGRSRGFGFVYFXXXXXXXXXXXXXXXXXYLGRPLRISYALDKVRGGPVVVP 450
           VRIMYDKD+GRSRGFGFV F                  LGRPLRIS+AL+KVRGGP+VVP
Sbjct: 54  VRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAMDGKALLGRPLRISFALEKVRGGPIVVP 113

Query: 451 RLANSGIANARKN 489
           RL+++G  N+ +N
Sbjct: 114 RLSSAG-DNSNRN 125


>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus] gi|449522522|ref|XP_004168275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 145

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/64 (62%), Positives = 44/64 (68%)
 Frame = +1

Query: 271 VRIMYDKDTGRSRGFGFVYFXXXXXXXXXXXXXXXXXYLGRPLRISYALDKVRGGPVVVP 450
           VRI+YDKD+GRSRGFGFV F                  LGRPLRIS+ALDKVRG PVVVP
Sbjct: 73  VRIVYDKDSGRSRGFGFVNFANGNDAQCAKDAMDGKAVLGRPLRISFALDKVRGEPVVVP 132

Query: 451 RLAN 462
           RL+N
Sbjct: 133 RLSN 136


>gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indica Group]
          Length = 505

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 39/63 (61%), Positives = 44/63 (69%)
 Frame = +1

Query: 271 VRIMYDKDTGRSRGFGFVYFXXXXXXXXXXXXXXXXXYLGRPLRISYALDKVRGGPVVVP 450
           VRIMYDK++GRSRGFGFV+F                  LGRPLRIS+ALDKVRG PVVVP
Sbjct: 429 VRIMYDKNSGRSRGFGFVHFSNEYEAKCAKDAMDGKVMLGRPLRISFALDKVRGAPVVVP 488

Query: 451 RLA 459
           RL+
Sbjct: 489 RLS 491


>ref|XP_002321147.1| predicted protein [Populus trichocarpa] gi|222861920|gb|EEE99462.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 38/66 (57%), Positives = 44/66 (66%)
 Frame = +1

Query: 271 VRIMYDKDTGRSRGFGFVYFXXXXXXXXXXXXXXXXXYLGRPLRISYALDKVRGGPVVVP 450
           V I+YD+++GRSRGFGFV F                  LGRPLRISYAL++VRGGPVVVP
Sbjct: 47  VNILYDRNSGRSRGFGFVSFCKEDEAVSAKDAMDGKALLGRPLRISYALERVRGGPVVVP 106

Query: 451 RLANSG 468
           RL N G
Sbjct: 107 RLPNGG 112


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