BLASTX nr result

ID: Angelica22_contig00014112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00014112
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   131   7e-29
gb|ABR18062.1| unknown [Picea sitchensis]                             125   3e-27
ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   125   5e-27
ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   125   5e-27
ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   125   5e-27

>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score =  131 bits (329), Expect = 7e-29
 Identities = 74/134 (55%), Positives = 80/134 (59%)
 Frame = +3

Query: 3   VELAHGGRGNSSSTDRYSNHXXXXXXXXXXXXXXXXXVSRRSDYRVMVSGLPSXXXXXXX 182
           VELAHGGRG+SSS DRYS+H                 VSRRSDYRV+V+GLP        
Sbjct: 77  VELAHGGRGHSSSNDRYSSHGGSRGGRG---------VSRRSDYRVLVTGLP-------- 119

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXSGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGI 362
                                      SSASWQDLKDHMRRAGDVCFSQVFR+G GTTGI
Sbjct: 120 ---------------------------SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGI 152

Query: 363 VDYTNYDDMKYAIR 404
           VDYTNYDDMKYAI+
Sbjct: 153 VDYTNYDDMKYAIK 166


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  125 bits (315), Expect = 3e-27
 Identities = 72/134 (53%), Positives = 78/134 (58%)
 Frame = +3

Query: 3   VELAHGGRGNSSSTDRYSNHXXXXXXXXXXXXXXXXXVSRRSDYRVMVSGLPSXXXXXXX 182
           VELAHGGRG SS+ DRYS++                 VSRRS+YRV+VSGL         
Sbjct: 77  VELAHGGRGQSSTNDRYSSYSSAGGRSGG--------VSRRSEYRVLVSGL--------- 119

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXSGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGI 362
                                     PSSASWQDLKDHMRRAGDVCFSQVFR+  GTTGI
Sbjct: 120 --------------------------PSSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGI 153

Query: 363 VDYTNYDDMKYAIR 404
           VDYTNYDDMKYAIR
Sbjct: 154 VDYTNYDDMKYAIR 167


>ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 273

 Score =  125 bits (313), Expect = 5e-27
 Identities = 71/134 (52%), Positives = 78/134 (58%)
 Frame = +3

Query: 3   VELAHGGRGNSSSTDRYSNHXXXXXXXXXXXXXXXXXVSRRSDYRVMVSGLPSXXXXXXX 182
           VE AHGGRGNSSS DRYS+H                 VSRRS+YRV+V+GLP        
Sbjct: 50  VEAAHGGRGNSSSRDRYSSHSNGRGGRG---------VSRRSEYRVIVNGLP-------- 92

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXSGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGI 362
                                      SSASWQDLKDHMR+AGDVCFSQVF +G GTTGI
Sbjct: 93  ---------------------------SSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGI 125

Query: 363 VDYTNYDDMKYAIR 404
           VDYTNYDDMKYAI+
Sbjct: 126 VDYTNYDDMKYAIK 139


>ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 347

 Score =  125 bits (313), Expect = 5e-27
 Identities = 71/134 (52%), Positives = 78/134 (58%)
 Frame = +3

Query: 3   VELAHGGRGNSSSTDRYSNHXXXXXXXXXXXXXXXXXVSRRSDYRVMVSGLPSXXXXXXX 182
           VE AHGGRGNSSS DRYS+H                 VSRRS+YRV+V+GLP        
Sbjct: 103 VEAAHGGRGNSSSRDRYSSHSNGRGGRG---------VSRRSEYRVIVNGLP-------- 145

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXSGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGI 362
                                      SSASWQDLKDHMR+AGDVCFSQVF +G GTTGI
Sbjct: 146 ---------------------------SSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGI 178

Query: 363 VDYTNYDDMKYAIR 404
           VDYTNYDDMKYAI+
Sbjct: 179 VDYTNYDDMKYAIK 192


>ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 329

 Score =  125 bits (313), Expect = 5e-27
 Identities = 71/134 (52%), Positives = 78/134 (58%)
 Frame = +3

Query: 3   VELAHGGRGNSSSTDRYSNHXXXXXXXXXXXXXXXXXVSRRSDYRVMVSGLPSXXXXXXX 182
           VE AHGGRGNSSS DRYS+H                 VSRRS+YRV+V+GLP        
Sbjct: 103 VEAAHGGRGNSSSRDRYSSHSNGRGGRG---------VSRRSEYRVIVNGLP-------- 145

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXSGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGI 362
                                      SSASWQDLKDHMR+AGDVCFSQVF +G GTTGI
Sbjct: 146 ---------------------------SSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGI 178

Query: 363 VDYTNYDDMKYAIR 404
           VDYTNYDDMKYAI+
Sbjct: 179 VDYTNYDDMKYAIK 192


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