BLASTX nr result
ID: Angelica22_contig00013545
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00013545
(2343 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 408 e-115
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 405 e-114
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 404 e-113
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 403 e-113
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 405 e-113
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 408 bits (1048), Expect(2) = e-115
Identities = 200/413 (48%), Positives = 279/413 (67%), Gaps = 5/413 (1%)
Frame = -3
Query: 1405 LSVIVPTWMEQIKESYLGDSEVQKIIAEVTIDKTGPQQYYLTQS*LQFKGKWVIGNQGNL 1226
++V+VP W++ IK SY D KI++ + D + Y L L++KG+ +G +
Sbjct: 1131 ITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGLLKYKGRIYVGETTEI 1190
Query: 1225 RKRVFEELHSNGIGGHSGIKATARRICECFFWFTLKQDIGRWVRECDVCQASKGENLRKP 1046
R + E H++ GGHSGI+AT RI + F+W LK+ + ++REC CQ +K E++ P
Sbjct: 1191 RMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIP 1250
Query: 1045 GLLQPLAIPKEPWREIAMDFITGLPKSQGFEVIWVVVDRFSRYAHFVALQHPISTKSLAQ 866
GLL PL +P W I MDFI GLPKSQG +VI VVVDR ++YAHF+AL HP + + + Q
Sbjct: 1251 GLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQ 1310
Query: 865 SFFDHIYRLHGLPDSIVSDRDSIFLSEFWKSLFKICGTRLCMSTAYHPQSDGCTERVSQC 686
F D+I++LHG+P IV+DRD +F S F++ +FK +L STA+HPQ+DG TERV+QC
Sbjct: 1311 IFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQC 1370
Query: 685 LEQYLRGMTSQIPKNWATWLTAAEWWYNTTYHTTLQAYPFQVVYGIKPRHLPGQSRVYTN 506
LE YLR MT Q P+ W +WL AEWWYNTTYHT++Q PFQ +YG P + + + N
Sbjct: 1371 LESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQIT-EFAIPCN 1429
Query: 505 IS-----SLENLLVIKQQQWSTLKEILEIAQERMKSYADKNRPEREFSIGDWVYLKLQPY 341
+S +LE+ +I Q+ S++ E AQ R+K YADK R ER +GD VYLKLQPY
Sbjct: 1430 MSEEARVTLEDKALILQKLKSSIGE----AQRRIKFYADKGRSERTLELGDMVYLKLQPY 1485
Query: 340 RQITVAIRKNLKLSAKFFGPYKVLDKIGSVACKLELPATSRVHPVFHVSQLKK 182
RQ+ + IR +LKL +K++GP+KV++K+G+VA KL+LP + +HPVFHVSQLKK
Sbjct: 1486 RQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKK 1538
Score = 35.4 bits (80), Expect(2) = e-115
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 152 LPQLNEQGTFELKPLRKLNSKSVVKDHKVVYQLLIQWKGCSIDEATWED 6
LP + G + +P L + + + ++ V Q LI W+ + EATWED
Sbjct: 1550 LPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWED 1598
Score = 65.9 bits (159), Expect = 5e-08
Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 15/329 (4%)
Frame = -3
Query: 2341 FLENFVGGLQGDIKGMIRLLEPNSLAQAIKLARYYEQNLNSQPKKYSSYNSNYKGGTGTQ 2162
F F+ GL+GDIK + +P L ++ A+ YE+ NS+ K +++N N
Sbjct: 350 FTSCFISGLRGDIKHDVCGQKPQGLLESYWYAKNYEKAANSR-KAAANFNRN-------- 400
Query: 2161 VSAKSAATVTGGGSSNQSSLLIQSKTPEVINSKPKPLTYTPRGERRQKGLCYYCDEKFSK 1982
TGG + + +K +P G+++++ C++C E +
Sbjct: 401 ------RLQTGGNTGKN------------VYNKGQP---RQEGDKKEEKKCWFCKEPWFP 439
Query: 1981 GHECKKPQNFFMXXXXXXXXXXXXXXXXXXXXXEDEEEIC----------QSETVLLSAL 1832
H+CK Q +EEEI Q+E V +
Sbjct: 440 RHQCKVKQAIHALLVENEESVEVEEDSV------EEEEIKGEKQGEKLPEQTENVQEELM 493
Query: 1831 SMKETK---MKSPLQFNGLYK--GRNIKLLVDRGSTINLVSKRLSEELDLPVKKQKPIEI 1667
S+ ++ + P F+ + K G+ LVD GST + + + + ++ K ++
Sbjct: 494 SISQSAVYGLTRPDTFSVMIKVNGKKAVGLVDSGSTTTFMDSKFAIKSQCTLENTKMRKV 553
Query: 1666 LLPNGDSLKCDSYCSKFSWRLNEVNFMSEVGIANLSEWDIILGVQWLAQLGDFTCNYEDQ 1487
++ G LK + + + +F + + +L +DIILG W+ + T + +
Sbjct: 554 IVAGGGELKSELIVPGMEYEIQGESFTNSFNLLSLERYDIILGADWIFKYSPITLDLRKR 613
Query: 1486 TLQFMWRGEMVKLTMDTKLSLNGSFHQLS 1400
++ G +++ TK G + Q+S
Sbjct: 614 EMKITKGGRELEIQDFTK---PGKYFQVS 639
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 405 bits (1040), Expect(2) = e-114
Identities = 195/411 (47%), Positives = 272/411 (66%), Gaps = 1/411 (0%)
Frame = -3
Query: 1411 HQLSVIVPTWMEQIKESYLGDSEVQKIIAEVTIDKTGPQQYYLTQS*LQFKGKWVIGNQG 1232
H ++V++P W+ I+ SY D + KI++ + ++Y L L++KG+ +G
Sbjct: 993 HPMTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEAGLLKYKGRIYVGEAT 1052
Query: 1231 NLRKRVFEELHSNGIGGHSGIKATARRICECFFWFTLKQDIGRWVRECDVCQASKGENLR 1052
++R+++ HS+ GGHSG++AT RI F+W ++ ++ R++REC CQ +K E++
Sbjct: 1053 DIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVH 1112
Query: 1051 KPGLLQPLAIPKEPWREIAMDFITGLPKSQGFEVIWVVVDRFSRYAHFVALQHPISTKSL 872
PGLL PL IP W I MDFI GLPKSQG +VI VVVDR ++YAHF+AL HP + +
Sbjct: 1113 IPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQV 1172
Query: 871 AQSFFDHIYRLHGLPDSIVSDRDSIFLSEFWKSLFKICGTRLCMSTAYHPQSDGCTERVS 692
++F ++I++LHG+P I++DRD IF S ++ +FK +L STAYHPQ DG TERV+
Sbjct: 1173 VEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVN 1232
Query: 691 QCLEQYLRGMTSQIPKNWATWLTAAEWWYNTTYHTTLQAYPFQVVYGIKPRHLPGQSRVY 512
QCLE YLR MT Q P W +WL AEWWYNTT+HT +Q PF+ +YG P + + V
Sbjct: 1233 QCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQI-NEFSVP 1291
Query: 511 TNISSLENLLV-IKQQQWSTLKEILEIAQERMKSYADKNRPEREFSIGDWVYLKLQPYRQ 335
NIS + + K+ + LK L AQ RMK +ADKNR ER +GD VYLKL+PYRQ
Sbjct: 1292 CNISEEARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQ 1351
Query: 334 ITVAIRKNLKLSAKFFGPYKVLDKIGSVACKLELPATSRVHPVFHVSQLKK 182
IR +LKL +KF+GP+KVL KIG +A KL+LP +++HPVFHVSQLKK
Sbjct: 1352 SAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKK 1402
Score = 37.4 bits (85), Expect(2) = e-114
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2
Query: 152 LPQLNEQGTFELKPLRKLNSKSVVKDHKVVYQLLIQWKGCSIDEATWED 6
LP + G + +PL L + V + V Q LI W+ S EATWED
Sbjct: 1414 LPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWED 1462
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 404 bits (1037), Expect(2) = e-113
Identities = 193/410 (47%), Positives = 272/410 (66%), Gaps = 2/410 (0%)
Frame = -3
Query: 1405 LSVIVPTWMEQIKESYLGDSEVQKIIAEVTIDKTGPQQYYLTQS*LQFKGKWVIGNQGNL 1226
++ ++P W+ I+ SY GD + KI++ + + Y L++KG+ +G +
Sbjct: 1106 ITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEI 1165
Query: 1225 RKRVFEELHSNGIGGHSGIKATARRICECFFWFTLKQDIGRWVRECDVCQASKGENLRKP 1046
R+ + HS+ GGHSG++AT RI F+W LK+ + ++REC +CQ +K E++ P
Sbjct: 1166 REELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIP 1225
Query: 1045 GLLQPLAIPKEPWREIAMDFITGLPKSQGFEVIWVVVDRFSRYAHFVALQHPISTKSLAQ 866
GLL PL +P W I MDF+ GLPKS G +VI VVVDR ++YAHF+A+ HP + + + +
Sbjct: 1226 GLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVE 1285
Query: 865 SFFDHIYRLHGLPDSIVSDRDSIFLSEFWKSLFKICGTRLCMSTAYHPQSDGCTERVSQC 686
F ++I+RLHG+P +I++DRD IF S+ ++ +FK RL ST+YHPQ+DG TERV+QC
Sbjct: 1286 LFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQC 1345
Query: 685 LEQYLRGMTSQIPKNWATWLTAAEWWYNTTYHTTLQAYPFQVVYGIKPRHLPGQSRVYTN 506
LE YLR MT Q P W +WL AEWWYNTTYHT++Q PFQ +YG P + + V N
Sbjct: 1346 LESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQI-NEFSVPCN 1404
Query: 505 ISSLENLLVIKQQQ--WSTLKEILEIAQERMKSYADKNRPEREFSIGDWVYLKLQPYRQI 332
+S E + I+Q+ LK L AQ R+K YAD+NR ER ++GD VYLKLQPYRQ
Sbjct: 1405 VSE-EARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQT 1463
Query: 331 TVAIRKNLKLSAKFFGPYKVLDKIGSVACKLELPATSRVHPVFHVSQLKK 182
IR +LKL +KF+GP+K+++K+G VA KL+LP S +HPVFHVSQLKK
Sbjct: 1464 AFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKK 1513
Score = 35.4 bits (80), Expect(2) = e-113
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 152 LPQLNEQGTFELKPLRKLNSKSVVKDHKVVYQLLIQWKGCSIDEATWED 6
LP + G + +P+ L + + + V Q L+ W S EATWED
Sbjct: 1525 LPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWED 1573
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 403 bits (1036), Expect(2) = e-113
Identities = 193/408 (47%), Positives = 270/408 (66%)
Frame = -3
Query: 1405 LSVIVPTWMEQIKESYLGDSEVQKIIAEVTIDKTGPQQYYLTQS*LQFKGKWVIGNQGNL 1226
++V+VP W+ IK SY D + K+++ + +Y +++KG+ +G G +
Sbjct: 475 IAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIMKYKGRIYVGETGEI 534
Query: 1225 RKRVFEELHSNGIGGHSGIKATARRICECFFWFTLKQDIGRWVRECDVCQASKGENLRKP 1046
R ++ + HS+ GGH GI+AT +RI + F+W LK+ + +R C VCQ +K E++ P
Sbjct: 535 RGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTKSEHVHIP 594
Query: 1045 GLLQPLAIPKEPWREIAMDFITGLPKSQGFEVIWVVVDRFSRYAHFVALQHPISTKSLAQ 866
GLL PL +P W I+MDF+ GLPKS+G +VI VVVDR ++YAHF+AL HP + + + Q
Sbjct: 595 GLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQ 654
Query: 865 SFFDHIYRLHGLPDSIVSDRDSIFLSEFWKSLFKICGTRLCMSTAYHPQSDGCTERVSQC 686
F D+I++LHG+P +IV+DRD +F S F++ +FK +L STAYHPQ+DG TERV+QC
Sbjct: 655 VFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQC 714
Query: 685 LEQYLRGMTSQIPKNWATWLTAAEWWYNTTYHTTLQAYPFQVVYGIKPRHLPGQSRVYTN 506
LE YLR MT Q P+NW +W+ AEWWYNTTYHT +Q PF+ +YG P + S
Sbjct: 715 LESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDV 774
Query: 505 ISSLENLLVIKQQQWSTLKEILEIAQERMKSYADKNRPEREFSIGDWVYLKLQPYRQITV 326
L K+ LK +E AQ RMK YAD+NR ER+ +GD VYLKLQPYRQ
Sbjct: 775 SQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAF 834
Query: 325 AIRKNLKLSAKFFGPYKVLDKIGSVACKLELPATSRVHPVFHVSQLKK 182
IR +LKL K++GP+KVL+K+G+VA +L+LP + +HPVFHVSQLKK
Sbjct: 835 GIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKK 882
Score = 35.8 bits (81), Expect(2) = e-113
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 152 LPQLNEQGTFELKPLRKLNSKSVVKDHKVVYQLLIQWKGCSIDEATWED 6
LP + G + +P+ L + + +++ V Q LI W + EATWED
Sbjct: 894 LPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWED 942
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 405 bits (1040), Expect(2) = e-113
Identities = 190/410 (46%), Positives = 273/410 (66%)
Frame = -3
Query: 1405 LSVIVPTWMEQIKESYLGDSEVQKIIAEVTIDKTGPQQYYLTQS*LQFKGKWVIGNQGNL 1226
+S VPTW++++ E Y D ++++A++ ++ + L Q ++ K + +G L
Sbjct: 1062 ISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQL 1121
Query: 1225 RKRVFEELHSNGIGGHSGIKATARRICECFFWFTLKQDIGRWVRECDVCQASKGENLRKP 1046
+++V + +H +GGHSG AT ++ + F+W ++ D+ ++V+ C VCQ SK + + P
Sbjct: 1122 QQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYP 1181
Query: 1045 GLLQPLAIPKEPWREIAMDFITGLPKSQGFEVIWVVVDRFSRYAHFVALQHPISTKSLAQ 866
GLLQPL +P + W I++DFI GLP+S + I VVVD+FS+Y HF+ L HP + +A+
Sbjct: 1182 GLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVAR 1241
Query: 865 SFFDHIYRLHGLPDSIVSDRDSIFLSEFWKSLFKICGTRLCMSTAYHPQSDGCTERVSQC 686
F D++Y+LHGLP +I+SDRD IF S FW+ LF+I GT L MS++YHPQSDG TER++QC
Sbjct: 1242 VFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQC 1301
Query: 685 LEQYLRGMTSQIPKNWATWLTAAEWWYNTTYHTTLQAYPFQVVYGIKPRHLPGQSRVYTN 506
LE +LR P W+ WL+ AE+WYNTT H+TL PF+V+YG PRH
Sbjct: 1302 LETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTLGRTPFEVLYGHTPRHFGILVDTVVP 1361
Query: 505 ISSLENLLVIKQQQWSTLKEILEIAQERMKSYADKNRPEREFSIGDWVYLKLQPYRQITV 326
LE L ++ +K L AQ+RMK ADK R ER FS+GDWVYLKLQPY Q +V
Sbjct: 1362 QPELETWLKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSV 1421
Query: 325 AIRKNLKLSAKFFGPYKVLDKIGSVACKLELPATSRVHPVFHVSQLKKVV 176
A R N KLS KFFGP+++ D++GSVA +L LPA+S +HP+FHVSQLK+V+
Sbjct: 1422 ATRSNHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQLKRVI 1471
Score = 32.3 bits (72), Expect(2) = e-113
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -2
Query: 167 RVHRQLPQLNEQGTFELKPLRKLNSKSVVKDHKVVYQLLIQWKGCSIDEATWED 6
R QLPQ + G ++ P R L + + + +++ Q+ + W G + D ATWED
Sbjct: 1476 RASPQLPQ--DVGPIQV-PTRILQRRFIDRGGELIAQVKVVWSGMTEDLATWED 1526
Score = 83.2 bits (204), Expect = 3e-13
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 12/310 (3%)
Frame = -3
Query: 2329 FVGGLQGDIKGMIRLLEPNSLAQAIKLARYYEQNLNSQPKKYSSYNSNYKGG-TGTQVSA 2153
F+ GL+ DIK +I + P++L A LA E+ ++ + S +S++ G TG Q+SA
Sbjct: 296 FIDGLRDDIKAVIMVQRPSNLDTACSLALVQEEATTARRWRRSEPSSSHAGPKTGVQLSA 355
Query: 2152 KSAATVTGGGSSNQSSLLIQSKTPEVINSKPKPLTYTPRGERRQKGLCYYCDEKFSKGHE 1973
+ T SN+ S S + ++ + R RR KGLC C EK++ GH+
Sbjct: 356 STKWT------SNKDSTQSASHSDKLESL---------RRFRRAKGLCDKCAEKWNPGHK 400
Query: 1972 CKKPQNFFMXXXXXXXXXXXXXXXXXXXXXEDEEEICQSET-----------VLLSALSM 1826
C +EE+ +S+ V +S +
Sbjct: 401 CAATAQLHAMEEVWSLLV--------------DEEVPESDLSPPEPAPEQLFVTISKSAW 446
Query: 1825 KETKMKSPLQFNGLYKGRNIKLLVDRGSTINLVSKRLSEELDLPVKKQKPIEILLPNGDS 1646
+ + L+ NG + + +L+D GS+ ++ +L L +++ + NG
Sbjct: 447 TGSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPHLQGVTSMASTLQVQVANGAM 506
Query: 1645 LKCDSYCSKFSWRLNEVNFMSEVGIANLSEWDIILGVQWLAQLGDFTCNYEDQTLQFMWR 1466
+ C + W++ +F S+V L +D+++G+ WL ++ + L ++
Sbjct: 507 VTCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWAQKWLIIPYQ 566
Query: 1465 GEMVKLTMDT 1436
G V L +T
Sbjct: 567 GSSVLLQGNT 576