BLASTX nr result

ID: Angelica22_contig00013509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013509
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307758.1| high mobility group family [Populus trichoca...   120   9e-26
gb|ABK95398.1| unknown [Populus trichocarpa]                          120   9e-26
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...   120   1e-25
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...   119   3e-25
ref|XP_002510615.1| transcription factor, putative [Ricinus comm...   113   1e-23

>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| high mobility group family
           [Populus trichocarpa]
          Length = 329

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 6/123 (4%)
 Frame = -2

Query: 498 VLYHPNHHKPSES------AIMPYDLNXXXXXXXXXXXXXRMGPKPNRSGYNFYFAEKHS 337
           VLYHP+    S S      AI+PY  N                PKPNRSGYNF+FAEKH 
Sbjct: 197 VLYHPDQQDLSNSIPQYDGAIVPYTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHY 256

Query: 336 ELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVKEQEEA 157
           +LK   P +EREFTKMIG+SW+ LS EE+ VY  I +KDKERY++EL+EYKEK++ ++  
Sbjct: 257 KLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKEKLQLRQAM 316

Query: 156 NKE 148
             E
Sbjct: 317 EVE 319


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 6/123 (4%)
 Frame = -2

Query: 498 VLYHPNHHKPSES------AIMPYDLNXXXXXXXXXXXXXRMGPKPNRSGYNFYFAEKHS 337
           VLYHP+    S S      AI+PY  N                PKPNRSGYNF+FAEKH 
Sbjct: 185 VLYHPDQQDLSNSIPQYDGAIVPYTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHY 244

Query: 336 ELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVKEQEEA 157
           +LK   P +EREFTKMIG+SW+ LS EE+ VY  I +KDKERY++EL+EYKEK++ ++  
Sbjct: 245 KLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKEKLQLRQAM 304

Query: 156 NKE 148
             E
Sbjct: 305 EVE 307


>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score =  120 bits (300), Expect = 1e-25
 Identities = 65/128 (50%), Positives = 80/128 (62%), Gaps = 10/128 (7%)
 Frame = -2

Query: 498 VLYHPNHHKPSE------SAIMPYDLNXXXXXXXXXXXXXRMG----PKPNRSGYNFYFA 349
           VLYHP+   PS+      +AI+PY                R G    PKPNRSGYNF+FA
Sbjct: 191 VLYHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFA 250

Query: 348 EKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVKE 169
           EKH +LK   P +EREFTKMIGESW  LS EE+ VY  I +KDKERY++EL+EYKEK++ 
Sbjct: 251 EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRL 310

Query: 168 QEEANKEN 145
             E +  N
Sbjct: 311 GTEVDGAN 318


>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score =  119 bits (297), Expect = 3e-25
 Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 10/128 (7%)
 Frame = -2

Query: 498 VLYHPNHHKPSE------SAIMPYDLNXXXXXXXXXXXXXRMG----PKPNRSGYNFYFA 349
           VLYHP    PS+      +AI+PY                R G    PKPNRSGYNF+FA
Sbjct: 191 VLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFA 250

Query: 348 EKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKEKVKE 169
           EKH +LK   P +EREFTKMIGESW  LS EE+ VY  I +KDKERY++EL+EYKEK++ 
Sbjct: 251 EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRM 310

Query: 168 QEEANKEN 145
             + +  N
Sbjct: 311 GTDVDGAN 318


>ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
           gi|223551316|gb|EEF52802.1| transcription factor,
           putative [Ricinus communis]
          Length = 338

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 14/131 (10%)
 Frame = -2

Query: 498 VLYHPNHHKPS--------ESAIMPY------DLNXXXXXXXXXXXXXRMGPKPNRSGYN 361
           VLYHP+  + S        ++A++PY      D +                PKPNRSGYN
Sbjct: 199 VLYHPDQPQHSFSSISQCNDNALIPYTGSRRRDHSARRRRRRSRRAGDPSYPKPNRSGYN 258

Query: 360 FYFAEKHSELKGRCPEKEREFTKMIGESWTKLSREEKNVYNEIAVKDKERYQKELREYKE 181
           F+FAEKH +LK   P +EREFTK+IG+SW+ LS EE+ VY  I +KDKERY++EL+EYKE
Sbjct: 259 FFFAEKHYKLKSLYPNREREFTKIIGQSWSNLSAEERMVYQNIGLKDKERYKRELKEYKE 318

Query: 180 KVKEQEEANKE 148
           ++K +E    E
Sbjct: 319 RLKLRETMELE 329


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