BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013416
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    67   5e-12
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    62   2e-11
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               64   2e-11
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    62   7e-11
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            64   9e-11

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 67.4 bits (163), Expect(2) = 5e-12
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +1

Query: 76   WTIAVWHQLGISKCSFTPWLAFQDRLLTKNRMASFGMQVDEQCVLCRAPNETRNHLFITC 255
            W  A+W      K +F  WLA  DRL T ++MAS+   +   CVLC    E+R+HLF +C
Sbjct: 1239 WHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSC 1298

Query: 256  SFSSRVFSRFAQYL 297
            +FSS ++ R  + L
Sbjct: 1299 NFSSHIWDRLTRRL 1312



 Score = 30.8 bits (68), Expect(2) = 5e-12
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 362  LLDYLYLAVAVHLIWKERNDRLHNNQDKKEMEISSCIKRMVRERV 496
            LL Y++ A  +H +W+ERN R H +       I   I R  R R+
Sbjct: 1340 LLRYVFQAT-IHTLWRERNKRRHGDLPIPSDHIIKFIDRQTRNRL 1383


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 27/70 (38%), Positives = 42/70 (60%)
 Frame = +1

Query: 76  WTIAVWHQLGISKCSFTPWLAFQDRLLTKNRMASFGMQVDEQCVLCRAPNETRNHLFITC 255
           W  +VW +  I K +F  W+A   RL T++R+  +G+ +   CVLC   +ET +HLF  C
Sbjct: 154 WQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQC 213

Query: 256 SFSSRVFSRF 285
            FS+ ++S F
Sbjct: 214 QFSNEIWSFF 223



 Score = 34.3 bits (77), Expect(2) = 2e-11
 Identities = 16/52 (30%), Positives = 32/52 (61%)
 Frame = +2

Query: 341 SSRAIHKLLDYLYLAVAVHLIWKERNDRLHNNQDKKEMEISSCIKRMVRERV 496
           SS+ +  ++  L+ A +V+LIW+ERN R+H    +    I   +++++R R+
Sbjct: 247 SSKNLSLIIKLLFQA-SVYLIWRERNCRIHTTHSRTPPTIIKEVQQLIRARL 297


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 64.3 bits (155), Expect(2) = 2e-11
 Identities = 29/75 (38%), Positives = 44/75 (58%)
 Frame = +1

Query: 76   WTIAVWHQLGISKCSFTPWLAFQDRLLTKNRMASFGMQVDEQCVLCRAPNETRNHLFITC 255
            W  AVW +  + K +F  W+   +RL T++R+  +G  +   CVLC   +E+R HLF  C
Sbjct: 986  WHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRC 1045

Query: 256  SFSSRVFSRFAQYLN 300
             FSS ++S F + LN
Sbjct: 1046 QFSSEIWSFFMRALN 1060



 Score = 31.6 bits (70), Expect(2) = 2e-11
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +2

Query: 362  LLDYLYLAVAVHLIWKERNDRLHNNQDKKEMEISSCIKRMVRERV 496
            L+  L    +V+ IW+ERN R+H+N  +    I   I+ +VR R+
Sbjct: 1085 LITKLLFHASVYFIWRERNLRIHSNSVRPAHLIIKEIQLIVRARL 1129


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 62.4 bits (150), Expect(2) = 7e-11
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = +1

Query: 73  SWTIAVWHQLGISKCSFTPWLAFQDRLLTKNRMASFGMQVDEQCVLCRAPNETRNHLFIT 252
           +W   VW      K SF  WLA ++RL T +RM ++       CV C +P ETR+HLF  
Sbjct: 777 AWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQ 836

Query: 253 CSFSSRVFSRFAQ 291
           C +SS +++  A+
Sbjct: 837 CCYSSEIWTSIAK 849



 Score = 32.0 bits (71), Expect(2) = 7e-11
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 353  IHKLLDYLYLAVAVHLIWKERNDRLHNNQDKKEMEISSCIKRMVRERV 496
            I   L      V++H IW+ERN R H  + +    +   I + +R ++
Sbjct: 875  IQSFLSRYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQIDKTIRNQL 922


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 63.5 bits (153), Expect(2) = 9e-11
 Identities = 30/76 (39%), Positives = 42/76 (55%)
 Frame = +1

Query: 70  LSWTIAVWHQLGISKCSFTPWLAFQDRLLTKNRMASFGMQVDEQCVLCRAPNETRNHLFI 249
           ++W   VW      K S   W+A ++RL T +RM S+    D  CVLC    ETR+HLF 
Sbjct: 310 VNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFF 369

Query: 250 TCSFSSRVFSRFAQYL 297
           TC +S+ V+S   + L
Sbjct: 370 TCPYSAEVWSTLTRKL 385



 Score = 30.4 bits (67), Expect(2) = 9e-11
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 386 VAVHLIWKERNDRLHNNQDKKEMEISSCIKRMVRERVYS 502
           + +H +WKERN R H    +   ++   + + VR R+ S
Sbjct: 420 LTLHSLWKERNGRRHGEVPQAAAQMVRFLDKQVRNRISS 458