BLASTX nr result

ID: Angelica22_contig00013314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013314
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4...   127   1e-27
pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dw...   118   4e-25
ref|NP_195463.1| hydrolase, alpha/beta fold family protein [Arab...   118   4e-25
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   117   1e-24
emb|CBI33729.3| unnamed protein product [Vitis vinifera]              116   2e-24

>pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4HRY|A Chain A,
           The Structure Of Arabidopsis Thaliana Kai2
           gi|453056153|pdb|4HTA|A Chain A, The Structure Of The
           Karrikin Insensitive (kai2) Protein In Arabidopsis
           Thaliana
          Length = 288

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/79 (73%), Positives = 65/79 (82%), Gaps = 3/79 (3%)
 Frame = +1

Query: 37  HSHHHNKREKSKSRK---MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVD 207
           H HHH+    S  +K   MG+VE AHNVKV+GSG  TIVL HGFGTDQSVWKHLVPH+VD
Sbjct: 1   HHHHHHLESTSLYKKAGFMGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVD 60

Query: 208 DYRVILFDNMGAGTTNPDY 264
           DYRV+L+DNMGAGTTNPDY
Sbjct: 61  DYRVVLYDNMGAGTTNPDY 79


>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
           (atd14l)
          Length = 272

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +1

Query: 82  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 261
           MG+VE AHNVKV+GSG  TIVL HGFGTDQSVWKHLVPH+VDDYRV+L+DNMGAGTTNPD
Sbjct: 3   MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 62

Query: 262 Y 264
           Y
Sbjct: 63  Y 63


>ref|NP_195463.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana]
           gi|444302309|pdb|4IH1|A Chain A, Crystal Structure Of
           Karrikin Insensitive 2 (kai2) From Arabidopsis Thaliana
           gi|4468813|emb|CAB38214.1| putative protein [Arabidopsis
           thaliana] gi|7270729|emb|CAB80412.1| putative protein
           [Arabidopsis thaliana] gi|15810303|gb|AAL07039.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259141|gb|AAM14286.1| unknown protein [Arabidopsis
           thaliana] gi|332661398|gb|AEE86798.1| hydrolase,
           alpha/beta fold family protein [Arabidopsis thaliana]
          Length = 270

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 57/61 (93%)
 Frame = +1

Query: 82  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 261
           MG+VE AHNVKV+GSG  TIVL HGFGTDQSVWKHLVPH+VDDYRV+L+DNMGAGTTNPD
Sbjct: 1   MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 60

Query: 262 Y 264
           Y
Sbjct: 61  Y 61


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  117 bits (292), Expect = 1e-24
 Identities = 50/61 (81%), Positives = 58/61 (95%)
 Frame = +1

Query: 82  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 261
           MGIVE AHNVK+LG+G + IVLAHGFGTDQSVWKHLVPH++DD++V+LFDNMGAGTTNPD
Sbjct: 1   MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60

Query: 262 Y 264
           Y
Sbjct: 61  Y 61


>emb|CBI33729.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +1

Query: 82  MGIVEAAHNVKVLGSGAETIVLAHGFGTDQSVWKHLVPHIVDDYRVILFDNMGAGTTNPD 261
           MGIVE AHN+KV+GSG + IVLAHGFGTDQS+WKHLVPH+VDDYRVILFDNMGAGTTNP+
Sbjct: 1   MGIVEEAHNLKVVGSGEQIIVLAHGFGTDQSLWKHLVPHLVDDYRVILFDNMGAGTTNPE 60

Query: 262 Y 264
           Y
Sbjct: 61  Y 61


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