BLASTX nr result

ID: Angelica22_contig00013297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013297
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   117   1e-24
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   117   1e-24
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   114   6e-24
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/68 (79%), Positives = 58/68 (85%)
 Frame = +1

Query: 1   GDLQNVVIPRPNPNGEPSPGVGKVFLEYDDAEGAAKARAGLNGRKFGGNQVVAVFYPENK 180
           G+L NV IPRP PNGEP+PG+GKVFLEY D +GA KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 501 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 560

Query: 181 FQQQEYDG 204
           F Q EYDG
Sbjct: 561 FSQGEYDG 568


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/68 (79%), Positives = 58/68 (85%)
 Frame = +1

Query: 1   GDLQNVVIPRPNPNGEPSPGVGKVFLEYDDAEGAAKARAGLNGRKFGGNQVVAVFYPENK 180
           G+L NV IPRP PNGEP+PG+GKVFLEY D +GA KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 326 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 385

Query: 181 FQQQEYDG 204
           F Q EYDG
Sbjct: 386 FSQGEYDG 393


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/68 (79%), Positives = 58/68 (85%)
 Frame = +1

Query: 1   GDLQNVVIPRPNPNGEPSPGVGKVFLEYDDAEGAAKARAGLNGRKFGGNQVVAVFYPENK 180
           G+L NV IPRP PNGEP+PG+GKVFLEY D +GA KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 498 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENK 557

Query: 181 FQQQEYDG 204
           F Q EYDG
Sbjct: 558 FSQGEYDG 565


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
           subunit B; AltName: Full=U2 small nuclear
           ribonucleoprotein auxiliary factor large subunit B;
           Short=U2 snRNP auxiliary factor large subunit B
           gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
           large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = +1

Query: 1   GDLQNVVIPRPNPNGEPSPGVGKVFLEYDDAEGAAKARAGLNGRKFGGNQVVAVFYPENK 180
           G L NVVIPRP+PNGEP+PGVGKVFLEY D + ++KAR  LNGRKFGGNQVVAVFYPENK
Sbjct: 506 GSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENK 565

Query: 181 FQQQEYDG 204
           F + +YDG
Sbjct: 566 FYEGDYDG 573


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/67 (80%), Positives = 58/67 (86%)
 Frame = +1

Query: 1   GDLQNVVIPRPNPNGEPSPGVGKVFLEYDDAEGAAKARAGLNGRKFGGNQVVAVFYPENK 180
           G L NVVIPRP PNGE +PGVGKVFLEY D EG++KARAG+NGRKF GNQVVAVFYPENK
Sbjct: 474 GLLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKFDGNQVVAVFYPENK 533

Query: 181 FQQQEYD 201
           F Q EYD
Sbjct: 534 FSQGEYD 540


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