BLASTX nr result

ID: Angelica22_contig00013238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013238
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CBI23204.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...   108   7e-22
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16

>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = -1

Query: 543 AGNYMQLAHNYASTARWDDVGEALIQMRSQGLKKLPGWSFFELQGTITTFFTDHSSHPQY 364
           AGNY+QLAH+YAS  RWD VGE   QM+S  LKKLPGWSF EL GTITTFFTDHSSHPQ+
Sbjct: 652 AGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQF 711

Query: 363 EEIVALLMFLSEEIRKPDI 307
           EEI+ +L  L  E+RK  I
Sbjct: 712 EEIMLVLKILGSEMRKVGI 730


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  112 bits (281), Expect = 3e-23
 Identities = 53/84 (63%), Positives = 63/84 (75%)
 Frame = -1

Query: 543 AGNYMQLAHNYASTARWDDVGEALIQMRSQGLKKLPGWSFFELQGTITTFFTDHSSHPQY 364
           AGNY+QLAH+YAS  RWD VGE   QM+S  LKKLPGWSF EL GTITTFFTDHSSHPQ+
Sbjct: 652 AGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQF 711

Query: 363 EEIVALLMFLSEEIRKPDIFNPKE 292
           EEI+  ++ L++  R     NP +
Sbjct: 712 EEIIDRVLLLNKRRRFNISMNPSQ 735


>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = -1

Query: 543 AGNYMQLAHNYASTARWDDVGEALIQMRSQGLKKLPGWSFFELQGTITTFFTDHSSHPQY 364
           AGN++QLAH YAS  +W++VGEA   MRS GLKK+PGWSF ++ GTITTFFTDH+SHPQ+
Sbjct: 673 AGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQF 732

Query: 363 EEIVALLMFLSEEIRK 316
           +EIV  L FL +E+ K
Sbjct: 733 QEIVCTLKFLRKEMIK 748


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  108 bits (269), Expect = 7e-22
 Identities = 52/90 (57%), Positives = 66/90 (73%)
 Frame = -1

Query: 543 AGNYMQLAHNYASTARWDDVGEALIQMRSQGLKKLPGWSFFELQGTITTFFTDHSSHPQY 364
           AGN++QLAH YAS  +W++VGEA   MRS GLKK+PGWSF ++ GTITTFFTDH+SHPQ+
Sbjct: 665 AGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQF 724

Query: 363 EEIVALLMFLSEEIRKPDIFNPKEIFREDS 274
           +EIV  L  L +E+ K       EI+ E S
Sbjct: 725 QEIVCTLKILRKEMIK---MEEVEIYLESS 751


>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/74 (55%), Positives = 54/74 (72%)
 Frame = -1

Query: 540 GNYMQLAHNYASTARWDDVGEALIQMRSQGLKKLPGWSFFELQGTITTFFTDHSSHPQYE 361
           GN++QLA++YAS +RWD V +A  QMRS GLKK PGWS  E+ GT  TFF  H+SHP+ E
Sbjct: 654 GNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIE 713

Query: 360 EIVALLMFLSEEIR 319
           +I+  +  LS+ IR
Sbjct: 714 KIILTVKALSKNIR 727


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