BLASTX nr result

ID: Angelica22_contig00013186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013186
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...   129   8e-28
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...   129   1e-27
emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]          129   1e-27
gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]                     129   1e-27
ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloro...   109   9e-22

>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score =  129 bits (324), Expect = 8e-28
 Identities = 75/116 (64%), Positives = 83/116 (71%)
 Frame = -1

Query: 725 PKHLRNSATFLRPISAVEAPEKVVELGDKISDLTLSDAQKLVEYLQETLXXXXXXXXXXX 546
           PK     ATFLRP++AVEAPEKVV+LGD+IS+LTL+DAQKLVEYLQ+ L           
Sbjct: 39  PKLQNRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAA 98

Query: 545 XXXXXXXXXXXXXXXVEEKTEFDVVIDEVPSNARIATIKAVRAITSLALKEAKELI 378
                           EEKTEFDVVIDEVPSNARIATIKAVRA+TSLALKEAKELI
Sbjct: 99  VVAAPGAAAEAPAVV-EEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELI 153


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score =  129 bits (323), Expect = 1e-27
 Identities = 75/116 (64%), Positives = 83/116 (71%)
 Frame = -1

Query: 725 PKHLRNSATFLRPISAVEAPEKVVELGDKISDLTLSDAQKLVEYLQETLXXXXXXXXXXX 546
           PK     ATFLRP++AVEAPEKVV+LGD+IS+LTL+DAQKLVEYLQ+ L           
Sbjct: 39  PKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAA 98

Query: 545 XXXXXXXXXXXXXXXVEEKTEFDVVIDEVPSNARIATIKAVRAITSLALKEAKELI 378
                           EEKTEFDVVIDEVPSNARIATIKAVRA+TSLALKEAKELI
Sbjct: 99  VAAAPGAAAEAPAVV-EEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELI 153


>emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
          Length = 191

 Score =  129 bits (323), Expect = 1e-27
 Identities = 75/116 (64%), Positives = 83/116 (71%)
 Frame = -1

Query: 725 PKHLRNSATFLRPISAVEAPEKVVELGDKISDLTLSDAQKLVEYLQETLXXXXXXXXXXX 546
           PK     ATFLRP++AVEAPEKVV+LGD+IS+LTL+DAQKLVEYLQ+ L           
Sbjct: 39  PKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAA 98

Query: 545 XXXXXXXXXXXXXXXVEEKTEFDVVIDEVPSNARIATIKAVRAITSLALKEAKELI 378
                           EEKTEFDVVIDEVPSNARIATIKAVRA+TSLALKEAKELI
Sbjct: 99  VAAAPGAAAEAPAVV-EEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELI 153


>gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]
          Length = 161

 Score =  129 bits (323), Expect = 1e-27
 Identities = 75/116 (64%), Positives = 83/116 (71%)
 Frame = -1

Query: 725 PKHLRNSATFLRPISAVEAPEKVVELGDKISDLTLSDAQKLVEYLQETLXXXXXXXXXXX 546
           PK     ATFLRP++AVEAPEKVV+LGD+IS+LTL+DAQKLVEYLQ+ L           
Sbjct: 39  PKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAA 98

Query: 545 XXXXXXXXXXXXXXXVEEKTEFDVVIDEVPSNARIATIKAVRAITSLALKEAKELI 378
                           EEKTEFDVVIDEVPSNARIATIKAVRA+TSLALKEAKELI
Sbjct: 99  VVAAPGAAAEAPGVV-EEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELI 153


>ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine
           max]
          Length = 188

 Score =  109 bits (272), Expect = 9e-22
 Identities = 73/155 (47%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
 Frame = -1

Query: 821 MASSTLSTLLVPLQRXXXXXXXXXXXXSLIP----FPKHLRNSATFLRP---ISAVEAPE 663
           MAS+TL+TL +                S  P    FP     +AT  RP   +SAVEAPE
Sbjct: 1   MASTTLTTLTLRTLSYPTPSSSYPTHLSAKPSSLQFPNLSHRAATTRRPRVVVSAVEAPE 60

Query: 662 KVVELGDKISDLTLSDAQKLVEYLQETLXXXXXXXXXXXXXXXXXXXXXXXXXXVEEKTE 483
           K+ +LGD+I+ LTL +A+ LV++LQ+ L                          VEEKTE
Sbjct: 61  KITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAGGAVADAPAVVEEKTE 120

Query: 482 FDVVIDEVPSNARIATIKAVRAITSLALKEAKELI 378
           FDVVI+EVPSNARIA IKAVRA+T+LALKEAKELI
Sbjct: 121 FDVVIEEVPSNARIAVIKAVRALTNLALKEAKELI 155


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