BLASTX nr result

ID: Angelica22_contig00013175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00013175
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   105   4e-21
ref|XP_002520668.1| nucleic acid binding protein, putative [Rici...   104   7e-21
ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containin...   103   1e-20
ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arab...   100   2e-19
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin...    99   3e-19

>ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 32-like [Glycine max]
          Length = 494

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/77 (64%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
 Frame = +1

Query: 49  MELYGH--SRNGSQA---DQWATPGQETGLEESMMRLGLLGREFYPERGGVPNCAYYMRT 213
           M+LYG   +RNGS      +W +PG +TGLEESM  L L G E YPER GVPNC YYMRT
Sbjct: 1   MDLYGRGQARNGSNPVNQPEWRSPGTDTGLEESMWHLTLGGGESYPERPGVPNCVYYMRT 60

Query: 214 GSCGYGNKCRYNHPRDR 264
           G CGYG++CRYNHPRDR
Sbjct: 61  GVCGYGSRCRYNHPRDR 77



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
 Frame = +1

Query: 55  LYGHSRNGSQADQWATP----GQETGLEESMMRLGLLGREFYPERGGVPNCAYYMRTGSC 222
           LYG ++  S    +A P       TG   S ++      +F+PER G P C YY+RTG C
Sbjct: 257 LYGVTQLSSPTSAFARPYTPLSSTTGPSGSNLK-----DQFFPERPGEPECQYYLRTGDC 311

Query: 223 GYGNKCRYNHPRD 261
            +G  CRY+HPRD
Sbjct: 312 KFGLACRYHHPRD 324


>ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540053|gb|EEF41630.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 478

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/80 (66%), Positives = 60/80 (75%), Gaps = 8/80 (10%)
 Frame = +1

Query: 49  MELYGHS--RNGSQADQ---WATPGQETGLEESMMRLGLL---GREFYPERGGVPNCAYY 204
           M+LYG S  RNG Q+ Q   W++ G ETGLEESM RLGL    G E YPER GVP+C YY
Sbjct: 1   MDLYGRSQARNGLQSGQQPEWSSGGAETGLEESMWRLGLNNSGGGESYPERPGVPDCVYY 60

Query: 205 MRTGSCGYGNKCRYNHPRDR 264
           MRTG CGYGN+CRYNHPR+R
Sbjct: 61  MRTGFCGYGNRCRYNHPRNR 80



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +1

Query: 55  LYGHSRNGSQADQWATPGQETGLEESMMRLGLLG---REFYPERGGVPNCAYYMRTGSCG 225
           LYG ++  S     A P        +     L G    + +PER G P C YY+RTG C 
Sbjct: 259 LYGVTQLSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYLRTGDCK 318

Query: 226 YGNKCRYNHPRDR 264
           +G+ CRY+HPRDR
Sbjct: 319 FGSSCRYHHPRDR 331


>ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Glycine max]
          Length = 471

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/77 (63%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
 Frame = +1

Query: 49  MELYGHS--RNGSQA---DQWATPGQETGLEESMMRLGLLGREFYPERGGVPNCAYYMRT 213
           M+LYG S  RNG       +W++PG +T LEESM  L L G E YPER GVPNC YYMRT
Sbjct: 1   MDLYGRSPARNGPNPVNQPEWSSPGTDTALEESMWHLTLGGGESYPERSGVPNCVYYMRT 60

Query: 214 GSCGYGNKCRYNHPRDR 264
           G CGYG +CRYNHPRDR
Sbjct: 61  GVCGYGGRCRYNHPRDR 77



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +1

Query: 160 EFYPERGGVPNCAYYMRTGSCGYGNKCRYNHPRD 261
           + YPER G P C YY+RTG C +G  CRY+HPRD
Sbjct: 291 QLYPERPGEPECQYYLRTGDCKFGLACRYHHPRD 324


>ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297326165|gb|EFH56585.1| zinc finger
           (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 471

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/69 (72%), Positives = 53/69 (76%), Gaps = 5/69 (7%)
 Frame = +1

Query: 73  NGSQADQ---WATPGQE--TGLEESMMRLGLLGREFYPERGGVPNCAYYMRTGSCGYGNK 237
           NGSQ+ Q   W TPG    TGLEESM RLGL G E YPER G P+CAYYMRTG CGYGN+
Sbjct: 9   NGSQSAQAPDWTTPGDADTTGLEESMWRLGL-GCESYPERPGAPDCAYYMRTGVCGYGNR 67

Query: 238 CRYNHPRDR 264
           CRYNHPRDR
Sbjct: 68  CRYNHPRDR 76


>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
           [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
           protein product [Vitis vinifera]
          Length = 475

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
 Frame = +1

Query: 49  MELYGHS--RNGSQAD---QWATPGQETGLEESMMRLGLLGREFYPERGGVPNCAYYMRT 213
           MELYG +  R+GSQ+D   +W+     +GLEESM RLGL  RE YPER GV +C YYM+T
Sbjct: 1   MELYGRAPARDGSQSDPSVEWSPVRAVSGLEESMWRLGLSSRESYPERPGVADCVYYMKT 60

Query: 214 GSCGYGNKCRYNHPRDRN 267
           G CG+G++CRYNHPRDR+
Sbjct: 61  GFCGFGSRCRYNHPRDRS 78


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