BLASTX nr result

ID: Angelica22_contig00012957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012957
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   360   3e-97
emb|CBI28700.3| unnamed protein product [Vitis vinifera]              360   3e-97
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]   360   3e-97
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   355   7e-96
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...   353   3e-95

>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  360 bits (924), Expect = 3e-97
 Identities = 192/314 (61%), Positives = 227/314 (72%), Gaps = 8/314 (2%)
 Frame = -3

Query: 919 MDTLLLHHTHRPCSATSKRPYAAVSSPS--------DPISPMSQDRISLLESFLSLSDKT 764
           MDTLL         + +KRP    + P         +P    S     LLE+FL LSD +
Sbjct: 1   MDTLL------EAPSMAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSS 54

Query: 763 TIPLLDHAFDTLIESSGSEYDQSVMIERALKLGSVLLEAGKRSARKRDYLRNAVVWPLPP 584
             P L  +F+ L++S   + DQ+++I+RAL+LGS LLEAGKRSARKR  + N++ W LPP
Sbjct: 55  G-PSLHLSFEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPP 113

Query: 583 DLTIKVFTMLDTQSVCYAAATCSFFRKCASDPSCYASIDLITVIPKVNNLVVSTMIQRAG 404
           DLTIKVF+MLDTQS+CY AATCS F KCA DP CYA+IDL TV+PKVNN VVSTMIQRAG
Sbjct: 114 DLTIKVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAG 173

Query: 403 KALRSIKLGLMPSPTASFGSSQPCIYSTRNPTDISGFSWNDKRSRQGKEXXXXXXXXXXX 224
           K L+S++LG++P PT S GSSQP +Y+ RN  D +GFSWNDKRSRQGKE           
Sbjct: 174 KVLQSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTA 233

Query: 223 XXSDNGAPGALLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKH 44
              D+GA GALL+RLHL NIER+DNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +
Sbjct: 234 LSGDSGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTN 293

Query: 43  CHLIERLFFESSKT 2
           CHLIERLFFESSKT
Sbjct: 294 CHLIERLFFESSKT 307


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  360 bits (924), Expect = 3e-97
 Identities = 192/314 (61%), Positives = 227/314 (72%), Gaps = 8/314 (2%)
 Frame = -3

Query: 919 MDTLLLHHTHRPCSATSKRPYAAVSSPS--------DPISPMSQDRISLLESFLSLSDKT 764
           MDTLL         + +KRP    + P         +P    S     LLE+FL LSD +
Sbjct: 1   MDTLL------EAPSMAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSS 54

Query: 763 TIPLLDHAFDTLIESSGSEYDQSVMIERALKLGSVLLEAGKRSARKRDYLRNAVVWPLPP 584
             P L  +F+ L++S   + DQ+++I+RAL+LGS LLEAGKRSARKR  + N++ W LPP
Sbjct: 55  G-PSLHLSFEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPP 113

Query: 583 DLTIKVFTMLDTQSVCYAAATCSFFRKCASDPSCYASIDLITVIPKVNNLVVSTMIQRAG 404
           DLTIKVF+MLDTQS+CY AATCS F KCA DP CYA+IDL TV+PKVNN VVSTMIQRAG
Sbjct: 114 DLTIKVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAG 173

Query: 403 KALRSIKLGLMPSPTASFGSSQPCIYSTRNPTDISGFSWNDKRSRQGKEXXXXXXXXXXX 224
           K L+S++LG++P PT S GSSQP +Y+ RN  D +GFSWNDKRSRQGKE           
Sbjct: 174 KVLQSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTA 233

Query: 223 XXSDNGAPGALLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKH 44
              D+GA GALL+RLHL NIER+DNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +
Sbjct: 234 LSGDSGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTN 293

Query: 43  CHLIERLFFESSKT 2
           CHLIERLFFESSKT
Sbjct: 294 CHLIERLFFESSKT 307


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score =  360 bits (924), Expect = 3e-97
 Identities = 192/314 (61%), Positives = 227/314 (72%), Gaps = 8/314 (2%)
 Frame = -3

Query: 919 MDTLLLHHTHRPCSATSKRPYAAVSSPS--------DPISPMSQDRISLLESFLSLSDKT 764
           MDTLL         + +KRP    + P         +P    S     LLE+FL LSD +
Sbjct: 1   MDTLL------EAPSMAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSS 54

Query: 763 TIPLLDHAFDTLIESSGSEYDQSVMIERALKLGSVLLEAGKRSARKRDYLRNAVVWPLPP 584
             P L  +F+ L++S   + DQ+++I+RAL+LGS LLEAGKRSARKR  + N++ W LPP
Sbjct: 55  G-PSLHLSFEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPP 113

Query: 583 DLTIKVFTMLDTQSVCYAAATCSFFRKCASDPSCYASIDLITVIPKVNNLVVSTMIQRAG 404
           DLTIKVF+MLDTQS+CY AATCS F KCA DP CYA+IDL TV+PKVNN VVSTMIQRAG
Sbjct: 114 DLTIKVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAG 173

Query: 403 KALRSIKLGLMPSPTASFGSSQPCIYSTRNPTDISGFSWNDKRSRQGKEXXXXXXXXXXX 224
           K L+S++LG++P PT S GSSQP +Y+ RN  D +GFSWNDKRSRQGKE           
Sbjct: 174 KVLQSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTA 233

Query: 223 XXSDNGAPGALLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKH 44
              D+GA GALL+RLHL NIER+DNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +
Sbjct: 234 LSGDSGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTN 293

Query: 43  CHLIERLFFESSKT 2
           CHLIERLFFESSKT
Sbjct: 294 CHLIERLFFESSKT 307


>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  355 bits (912), Expect = 7e-96
 Identities = 188/312 (60%), Positives = 230/312 (73%), Gaps = 6/312 (1%)
 Frame = -3

Query: 919 MDTLLLHHTHRPCSATSKRPYAAVSSPSDP------ISPMSQDRISLLESFLSLSDKTTI 758
           MDTLL    H P S  +KRP    SSPS P      +  M+    +LL++FL+L+D  ++
Sbjct: 1   MDTLL----HTPTSM-AKRPCPIPSSPSTPPPNPNKLPNMNNQVGNLLQTFLNLADSHSL 55

Query: 757 PLLDHAFDTLIESSGSEYDQSVMIERALKLGSVLLEAGKRSARKRDYLRNAVVWPLPPDL 578
            + D +F+ L++SS  + DQS++I+RALKLGS+LLEAG RSARKR    N++ W LPPDL
Sbjct: 56  SI-DQSFEHLLDSSPCDADQSLLIDRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDL 114

Query: 577 TIKVFTMLDTQSVCYAAATCSFFRKCASDPSCYASIDLITVIPKVNNLVVSTMIQRAGKA 398
           TIK+F+MLD QS+CYAAATCS F KCA DP CYA+IDL TV+PKVNN VVSTMIQRAGKA
Sbjct: 115 TIKLFSMLDAQSLCYAAATCSMFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKA 174

Query: 397 LRSIKLGLMPSPTASFGSSQPCIYSTRNPTDISGFSWNDKRSRQGKEXXXXXXXXXXXXX 218
           LRS+KLG++P PT   GS QP +Y  RN  ++S FSWNDK++RQGKE             
Sbjct: 175 LRSLKLGIVPGPTLPHGSCQPLVYGIRNAVEVSNFSWNDKKTRQGKESSTLTRYCLTPLS 234

Query: 217 SDNGAPGALLRRLHLNNIERVDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCH 38
            +NGA GA+LR LHL NIER+DNT+L  ALS CPSLLDLEI+GLHV+LRQTL SVS +C 
Sbjct: 235 GENGAAGAVLRGLHLYNIERIDNTSLCGALSACPSLLDLEIIGLHVDLRQTLVSVSMNCP 294

Query: 37  LIERLFFESSKT 2
           LIERLFFESSKT
Sbjct: 295 LIERLFFESSKT 306


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score =  353 bits (907), Expect = 3e-95
 Identities = 181/291 (62%), Positives = 225/291 (77%), Gaps = 1/291 (0%)
 Frame = -3

Query: 871 SKRPYAAVSSPSDPISPMSQDRI-SLLESFLSLSDKTTIPLLDHAFDTLIESSGSEYDQS 695
           +KRP +  SSPS   +P   +++ +LL +FL+L+D  ++ + DH+F+ L+ESS  + D+S
Sbjct: 2   AKRPCSFPSSPSPSPNPNMNNQLDNLLRTFLNLADSPSLSI-DHSFEHLLESSPCDADKS 60

Query: 694 VMIERALKLGSVLLEAGKRSARKRDYLRNAVVWPLPPDLTIKVFTMLDTQSVCYAAATCS 515
           ++I+RALKLGS+LLEAGKRSARKR  + N++ W LPPDLTIKV +MLDTQS+CYAAATCS
Sbjct: 61  LLIDRALKLGSLLLEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLDTQSLCYAAATCS 120

Query: 514 FFRKCASDPSCYASIDLITVIPKVNNLVVSTMIQRAGKALRSIKLGLMPSPTASFGSSQP 335
            F KCA DP CYA+IDL TV+PKVNN VVSTMIQRAGKAL S+KLG++P P  S GS QP
Sbjct: 121 MFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALLSLKLGIVPGPIMSRGSCQP 180

Query: 334 CIYSTRNPTDISGFSWNDKRSRQGKEXXXXXXXXXXXXXSDNGAPGALLRRLHLNNIERV 155
            +Y  +N  ++S FSWNDK++RQGKE              D+GA GA+LR LHL NIER+
Sbjct: 181 MVYGIQNAVEVSNFSWNDKKTRQGKESSILSRSCLNPLSGDSGAAGAVLRGLHLYNIERI 240

Query: 154 DNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLIERLFFESSKT 2
           DNT+L  ALS CPSLLDLEI+GLHVELRQTL SVS +C LIERLFFESSKT
Sbjct: 241 DNTSLCGALSACPSLLDLEIIGLHVELRQTLVSVSMNCPLIERLFFESSKT 291


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