BLASTX nr result

ID: Angelica22_contig00012900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012900
         (1708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307213.1| predicted protein [Populus trichocarpa] gi|2...   320   7e-85
ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   317   5e-84
ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   311   3e-82
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   311   3e-82
ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleop...   309   1e-81

>ref|XP_002307213.1| predicted protein [Populus trichocarpa] gi|222856662|gb|EEE94209.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  320 bits (820), Expect = 7e-85
 Identities = 159/233 (68%), Positives = 183/233 (78%), Gaps = 1/233 (0%)
 Frame = -3

Query: 962 KRPRMMESNPYFAVGSGSRGFQPYSDYGGGFQLSPFPVVRLRGIPFDCTDIXXXXXXXXX 783
           KR RMMESNPYFAV SG+ GFQPY  YGGGFQ  PFPVVRLRG+PF+C+D+         
Sbjct: 16  KRQRMMESNPYFAVSSGASGFQPYG-YGGGFQPPPFPVVRLRGLPFNCSDVEILKFFAGL 74

Query: 782 XXXXXXXXXXXGRFSGEAFVVFAGPMQADLALQRDRQNMGRRYVEVFRCKKQEYYNAVAS 603
                      GRF+GEAFVVFAGPMQ + ALQRDRQNMGRRYVEVFRCK+Q+YYNAVA+
Sbjct: 75  DIVDVLLVNKSGRFTGEAFVVFAGPMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAA 134

Query: 602 EVNYDGIHDNDFXXXXXXXXXXS-QDKDEMEYTEILKLRGLPFSTKKSNIAQFFKDYKLV 426
           EVNY+GI+DND+             DKD+MEYTEILK+RGLPFS KK+ I +FFKD+KL+
Sbjct: 135 EVNYEGIYDNDYHGSPPPSRAKRFSDKDQMEYTEILKMRGLPFSAKKAEIIEFFKDFKLI 194

Query: 425 EGKIHIACRADGKATGEAFVEFISAEEAKNAMAKDKKTIGSRYIELFPSTPDE 267
           + +IHIACR DGKATGEA+VEFISAEEAK AM+KDK TIGSRY+ELFPST DE
Sbjct: 195 DERIHIACRPDGKATGEAYVEFISAEEAKRAMSKDKMTIGSRYVELFPSTQDE 247


>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223539109|gb|EEF40705.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  317 bits (813), Expect = 5e-84
 Identities = 158/233 (67%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
 Frame = -3

Query: 962 KRPRMMESNPYFAVGSGSRGFQPYSDYGGGFQLSPFPVVRLRGIPFDCTDIXXXXXXXXX 783
           KRPRMMESNPYFAV  GS GFQPY  YGGGFQ +PFPVVRLRG+PF+CTDI         
Sbjct: 23  KRPRMMESNPYFAVSGGSSGFQPYG-YGGGFQSAPFPVVRLRGLPFNCTDIDIFKFFAGL 81

Query: 782 XXXXXXXXXXXGRFSGEAFVVFAGPMQADLALQRDRQNMGRRYVEVFRCKKQEYYNAVAS 603
                      GRF+GEAFVVFAG MQ + ALQRDRQNMGRRYVEVFRCK+Q+YYNAVA+
Sbjct: 82  DIVDVLLVNKNGRFTGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAA 141

Query: 602 EVNYDGIHDNDFXXXXXXXXXXS-QDKDEMEYTEILKLRGLPFSTKKSNIAQFFKDYKLV 426
           EVNY+GI+D D+             DKD++EYTEILK+RGLPFS KK  I +FFK+++LV
Sbjct: 142 EVNYEGIYDTDYHGSPPPSKAKRFSDKDQLEYTEILKMRGLPFSAKKPEIIEFFKEFELV 201

Query: 425 EGKIHIACRADGKATGEAFVEFISAEEAKNAMAKDKKTIGSRYIELFPSTPDE 267
           E +IHIACR DGKATGEA+VEF SA+EAK AM+KDK TIGSRY+ELFPSTPDE
Sbjct: 202 EDRIHIACRPDGKATGEAYVEFASADEAKRAMSKDKMTIGSRYVELFPSTPDE 254


>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
           vinifera]
          Length = 264

 Score =  311 bits (797), Expect = 3e-82
 Identities = 160/233 (68%), Positives = 177/233 (75%), Gaps = 1/233 (0%)
 Frame = -3

Query: 962 KRPRMMESNPYFAVGSGSRGFQPYSDYGGGFQLSPFPVVRLRGIPFDCTDIXXXXXXXXX 783
           KR RMMESNPYFAV S + GFQPY  YG GFQ   FPVVRLRG+PF+CTDI         
Sbjct: 23  KRQRMMESNPYFAVSSSASGFQPYG-YGSGFQPPTFPVVRLRGLPFNCTDIDIFKFFAGL 81

Query: 782 XXXXXXXXXXXGRFSGEAFVVFAGPMQADLALQRDRQNMGRRYVEVFRCKKQEYYNAVAS 603
                      GRFSGEA+VVFAG MQAD ALQRDRQNMGRRYVEVFRCKKQ+YY+AVAS
Sbjct: 82  DIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQDYYHAVAS 141

Query: 602 EVNYDGIHDNDFXXXXXXXXXXS-QDKDEMEYTEILKLRGLPFSTKKSNIAQFFKDYKLV 426
           EVNY+GI+DNDF             DKD+ME+TEILKLRGLPFS KKS I +FF D++L 
Sbjct: 142 EVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSVKKSQILEFFGDFELG 201

Query: 425 EGKIHIACRADGKATGEAFVEFISAEEAKNAMAKDKKTIGSRYIELFPSTPDE 267
           + K+HIACR DGKATGEA+VEF SAEEAK AM KDK TIGSRY+ELFPSTPDE
Sbjct: 202 DDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVELFPSTPDE 254


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  311 bits (797), Expect = 3e-82
 Identities = 160/233 (68%), Positives = 177/233 (75%), Gaps = 1/233 (0%)
 Frame = -3

Query: 962 KRPRMMESNPYFAVGSGSRGFQPYSDYGGGFQLSPFPVVRLRGIPFDCTDIXXXXXXXXX 783
           KR RMMESNPYFAV S + GFQPY  YG GFQ   FPVVRLRG+PF+CTDI         
Sbjct: 16  KRQRMMESNPYFAVSSSASGFQPYG-YGSGFQPPTFPVVRLRGLPFNCTDIDIFKFFAGL 74

Query: 782 XXXXXXXXXXXGRFSGEAFVVFAGPMQADLALQRDRQNMGRRYVEVFRCKKQEYYNAVAS 603
                      GRFSGEA+VVFAG MQAD ALQRDRQNMGRRYVEVFRCKKQ+YY+AVAS
Sbjct: 75  DIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEVFRCKKQDYYHAVAS 134

Query: 602 EVNYDGIHDNDFXXXXXXXXXXS-QDKDEMEYTEILKLRGLPFSTKKSNIAQFFKDYKLV 426
           EVNY+GI+DNDF             DKD+ME+TEILKLRGLPFS KKS I +FF D++L 
Sbjct: 135 EVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSVKKSQILEFFGDFELG 194

Query: 425 EGKIHIACRADGKATGEAFVEFISAEEAKNAMAKDKKTIGSRYIELFPSTPDE 267
           + K+HIACR DGKATGEA+VEF SAEEAK AM KDK TIGSRY+ELFPSTPDE
Sbjct: 195 DDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVELFPSTPDE 247


>ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
           2 [Glycine max]
          Length = 257

 Score =  309 bits (792), Expect = 1e-81
 Identities = 157/234 (67%), Positives = 178/234 (76%), Gaps = 2/234 (0%)
 Frame = -3

Query: 962 KRPRMMESNPYFAVGSGSRGFQPYSDYGGGFQLSPFPVVRLRGIPFDCTDIXXXXXXXXX 783
           KR RMMESNPYFAV SG+ G  PY  Y GGFQ  PFPVVRLRG+PF+CTDI         
Sbjct: 16  KRQRMMESNPYFAVSSGT-GNLPYG-YAGGFQPPPFPVVRLRGLPFNCTDIDILKFFAGL 73

Query: 782 XXXXXXXXXXXGRFSGEAFVVFAGPMQADLALQRDRQNMGRRYVEVFRCKKQEYYNAVAS 603
                      GRFSGEAFVVFAG MQ + ALQRDRQNMGRRYVEVFRCKKQ+YYNAVA 
Sbjct: 74  TIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAG 133

Query: 602 EVNYDGIHDNDFXXXXXXXXXXSQ--DKDEMEYTEILKLRGLPFSTKKSNIAQFFKDYKL 429
           E+NY+GI+DND+           +  DKD+MEYTEILK+RGLPF   KS I +FFKD+KL
Sbjct: 134 EINYEGIYDNDYHGSSPPPSRLKRFNDKDQMEYTEILKMRGLPFQVTKSQIVEFFKDFKL 193

Query: 428 VEGKIHIACRADGKATGEAFVEFISAEEAKNAMAKDKKTIGSRYIELFPSTPDE 267
           +E ++HIACR DGKATGEA+VEF+SAEEAK AM+KDK TIGSRY+ELFPSTPDE
Sbjct: 194 IEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYVELFPSTPDE 247


Top