BLASTX nr result

ID: Angelica22_contig00012652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012652
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   100   4e-40
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-37
ref|XP_002520859.1| conserved hypothetical protein [Ricinus comm...    96   2e-35
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian...    89   6e-35
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal...    89   1e-33

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  100 bits (249), Expect(2) = 4e-40
 Identities = 49/78 (62%), Positives = 61/78 (78%)
 Frame = -1

Query: 480 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERTGLSFLTISSDXX 301
           YRLF R+++IHQ+MGGG+AADV+LWKR+ VS   ++VATVAW+LFER+GLSFL+I SD  
Sbjct: 24  YRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGTIVVATVAWILFERSGLSFLSICSDVL 83

Query: 300 XXXXXXXXLRANYAEFRN 247
                   LRANYA FRN
Sbjct: 84  LILIVVLFLRANYAAFRN 101



 Score = 90.1 bits (222), Expect(2) = 4e-40
 Identities = 44/53 (83%), Positives = 49/53 (92%)
 Frame = -2

Query: 164 LPELVLSEEMVNNVAASFRAKINYVLLMAHEITLGKDFRLFFKVVVVLWLMSV 6
           LPEL LSEEMVN+VA SFR KINY+LLMAH+ITLGKDFRLFFKVV+ LWL+SV
Sbjct: 107 LPELELSEEMVNSVAGSFRVKINYLLLMAHDITLGKDFRLFFKVVLGLWLLSV 159


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 90.9 bits (224), Expect(2) = 2e-37
 Identities = 46/105 (43%), Positives = 64/105 (60%)
 Frame = -1

Query: 561 NGGPQTAADGEERCDAGTAAXXXXXSTYRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSA 382
           NGG  +  D      +  ++     S YRLF RQ ++HQ+MG G+AADV+LWK  +VS  
Sbjct: 14  NGGGDSRNDAAASTSSAPSSPRAITSGYRLFDRQDSLHQLMGAGKAADVLLWKWWHVSFG 73

Query: 381 ILLVATVAWLLFERTGLSFLTISSDXXXXXXXXXXLRANYAEFRN 247
           +++VATV+W +FER+GL FLTI SD          +RAN A+  N
Sbjct: 74  VIMVATVSWFIFERSGLPFLTICSDVLLILIVLLFVRANIADMIN 118



 Score = 90.5 bits (223), Expect(2) = 2e-37
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = -2

Query: 164 LPELVLSEEMVNNVAASFRAKINYVLLMAHEITLGKDFRLFFKVVVVLWLMS 9
           LPELVLSEEMVN+ AASFR KIN VLLMAH+ITLGKDFRLFFKVVV LWL+S
Sbjct: 124 LPELVLSEEMVNSAAASFRVKINNVLLMAHDITLGKDFRLFFKVVVFLWLLS 175


>ref|XP_002520859.1| conserved hypothetical protein [Ricinus communis]
           gi|223539990|gb|EEF41568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 96.3 bits (238), Expect(2) = 2e-35
 Identities = 48/96 (50%), Positives = 62/96 (64%)
 Frame = -1

Query: 534 GEERCDAGTAAXXXXXSTYRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAW 355
           GE R D   ++     S YRLFGRQ    Q MGGG+AADV+LWKR +VS +++++ATVAW
Sbjct: 16  GETRNDYTASSSCSSSSRYRLFGRQAPFQQFMGGGKAADVLLWKRWHVSFSVIIIATVAW 75

Query: 354 LLFERTGLSFLTISSDXXXXXXXXXXLRANYAEFRN 247
            +FER+GL FLTI SD          + AN+A  RN
Sbjct: 76  FIFERSGLPFLTICSDVLLVVTVLLFIHANFAAIRN 111



 Score = 78.6 bits (192), Expect(2) = 2e-35
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = -2

Query: 164 LPELVLSEEMVNNVAASFRAKINYVLLMAHEITLGKDFRLFFKVVV 27
           LPELVLSEEMVNN AASFR KIN VLLMAH+IT+GKDF+LFFKV +
Sbjct: 117 LPELVLSEEMVNNAAASFRVKINNVLLMAHDITIGKDFKLFFKVSI 162


>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
           Full=Reticulon-like protein B16; Short=AtRTNLB16
           gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
           thaliana] gi|28827594|gb|AAO50641.1| unknown protein
           [Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
           reticulon-like protein B16 [Arabidopsis thaliana]
          Length = 226

 Score = 88.6 bits (218), Expect(2) = 6e-35
 Identities = 38/78 (48%), Positives = 57/78 (73%)
 Frame = -1

Query: 480 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERTGLSFLTISSDXX 301
           YRL GRQ T+HQ MGGG+AAD++LW+R+++S  +++++TVAWL+FE +GL FL++SSD  
Sbjct: 23  YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVL 82

Query: 300 XXXXXXXXLRANYAEFRN 247
                   + A  + FRN
Sbjct: 83  LIVIMISFVHARVSAFRN 100



 Score = 84.7 bits (208), Expect(2) = 6e-35
 Identities = 38/52 (73%), Positives = 48/52 (92%)
 Frame = -2

Query: 164 LPELVLSEEMVNNVAASFRAKINYVLLMAHEITLGKDFRLFFKVVVVLWLMS 9
           LPELVLSEEMVN+ AASFR K+N++L+MAH++T+G DFRLFFKVV+ LWL+S
Sbjct: 106 LPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLS 157


>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641453|gb|AEE74974.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 227

 Score = 88.6 bits (218), Expect(2) = 1e-33
 Identities = 38/78 (48%), Positives = 57/78 (73%)
 Frame = -1

Query: 480 YRLFGRQTTIHQMMGGGRAADVMLWKRQYVSSAILLVATVAWLLFERTGLSFLTISSDXX 301
           YRL GRQ T+HQ MGGG+AAD++LW+R+++S  +++++TVAWL+FE +GL FL++SSD  
Sbjct: 23  YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVL 82

Query: 300 XXXXXXXXLRANYAEFRN 247
                   + A  + FRN
Sbjct: 83  LIVIMISFVHARVSAFRN 100



 Score = 80.1 bits (196), Expect(2) = 1e-33
 Identities = 38/53 (71%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = -2

Query: 164 LPELVLSEEMVNNVAASFRAKINYVLLMAHEITLGKDFRLFFK-VVVVLWLMS 9
           LPELVLSEEMVN+ AASFR K+N++L+MAH++T+G DFRLFFK VV+ LWL+S
Sbjct: 106 LPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLS 158


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