BLASTX nr result

ID: Angelica22_contig00012631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012631
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Rici...   183   1e-44
ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002331758.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago trunc...   180   1e-43
gb|ADK55590.1| plastid NEP interaction protein [Nicotiana bentha...   178   5e-43

>ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
           gi|223529804|gb|EEF31739.1| RING-H2 finger protein
           ATL4M, putative [Ricinus communis]
          Length = 235

 Score =  183 bits (465), Expect = 1e-44
 Identities = 95/118 (80%), Positives = 105/118 (88%), Gaps = 1/118 (0%)
 Frame = -2

Query: 352 FGDAVIKVKEY-SYAASVILGNVFSVIFTFLFASVGTLLGAMTGALIGQETESGFARGAA 176
           FGD V K+KE  ++A S ++GN+FS IFTF FA VGTLLGAMTGALIGQETESGF RGAA
Sbjct: 18  FGDFVEKIKEVCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAA 77

Query: 175 VGAISGAVFSIEVFESSLTIWHSEESGIRCVLYLIDVLASLLSGRLVRERIGPAMLSA 2
           VGAISGAVFSIEVFESSL +W S+ESGI C+LYLIDV+ASLLSGRLVRERIGPAMLSA
Sbjct: 78  VGAISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSA 135


>ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|222836721|gb|EEE75114.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  182 bits (462), Expect = 2e-44
 Identities = 96/118 (81%), Positives = 104/118 (88%), Gaps = 1/118 (0%)
 Frame = -2

Query: 352 FGDAVIKVKEY-SYAASVILGNVFSVIFTFLFASVGTLLGAMTGALIGQETESGFARGAA 176
           FG+ V KVKE  ++  S I+GN+FS IFTF FA VGTLLGAMTGALIGQETESGF RGAA
Sbjct: 7   FGNFVDKVKEVCNFVVSAIIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAA 66

Query: 175 VGAISGAVFSIEVFESSLTIWHSEESGIRCVLYLIDVLASLLSGRLVRERIGPAMLSA 2
           VGAISGAVFSIEVFESSL +W S+ESGI CVLYLIDV+ASLLSGRLVRERIGPAMLSA
Sbjct: 67  VGAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSA 124


>ref|XP_002331758.1| predicted protein [Populus trichocarpa] gi|222874455|gb|EEF11586.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 96/118 (81%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
 Frame = -2

Query: 352 FGDAVIKVKEY-SYAASVILGNVFSVIFTFLFASVGTLLGAMTGALIGQETESGFARGAA 176
           FG+ V KVKE  + A S I+GN+FS IFTF FA VG LLGAMTGALIGQETESGF RGAA
Sbjct: 7   FGNFVEKVKELCNLAVSAIIGNIFSAIFTFFFALVGALLGAMTGALIGQETESGFVRGAA 66

Query: 175 VGAISGAVFSIEVFESSLTIWHSEESGIRCVLYLIDVLASLLSGRLVRERIGPAMLSA 2
           VGAISGAVFSIEVFESSL +W S+ESGI CVLYLIDV+ASLLSGRLVRERIGPAMLSA
Sbjct: 67  VGAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSA 124


>ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago truncatula]
           gi|355513581|gb|AES95204.1| RING-H2 finger protein ATL4M
           [Medicago truncatula] gi|388507050|gb|AFK41591.1|
           unknown [Medicago truncatula]
          Length = 234

 Score =  180 bits (456), Expect = 1e-43
 Identities = 94/118 (79%), Positives = 105/118 (88%), Gaps = 1/118 (0%)
 Frame = -2

Query: 352 FGDAVIKVKEY-SYAASVILGNVFSVIFTFLFASVGTLLGAMTGALIGQETESGFARGAA 176
           FG+ V KVK++ + A SVI+GN+FS I TF FA VGTLLGA+TGALIGQETESGF RGAA
Sbjct: 18  FGNFVDKVKQFGTLAISVIIGNIFSAILTFCFALVGTLLGALTGALIGQETESGFIRGAA 77

Query: 175 VGAISGAVFSIEVFESSLTIWHSEESGIRCVLYLIDVLASLLSGRLVRERIGPAMLSA 2
           VGAISGAVFSIEVFESSL +WHS+ESGI C+LYLIDV+ SLLSGRLVRERIGPAMLSA
Sbjct: 78  VGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIVSLLSGRLVRERIGPAMLSA 135


>gb|ADK55590.1| plastid NEP interaction protein [Nicotiana benthamiana]
          Length = 241

 Score =  178 bits (451), Expect = 5e-43
 Identities = 94/117 (80%), Positives = 102/117 (87%), Gaps = 1/117 (0%)
 Frame = -2

Query: 349 GDAVIKVKE-YSYAASVILGNVFSVIFTFLFASVGTLLGAMTGALIGQETESGFARGAAV 173
           GD V + K+ +  A S I+GNVFS IFTF FA VGTLLGAMTGALIGQETESGF RGAAV
Sbjct: 25  GDLVDRAKDCFCLAVSTIVGNVFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAV 84

Query: 172 GAISGAVFSIEVFESSLTIWHSEESGIRCVLYLIDVLASLLSGRLVRERIGPAMLSA 2
           GAISGAVFS+EVFESSL +W S+ESGI CVLYLIDV+ASLLSGRLVRERIGPAMLSA
Sbjct: 85  GAISGAVFSLEVFESSLLLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSA 141


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