BLASTX nr result

ID: Angelica22_contig00012578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012578
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...    62   2e-07
ref|XP_003605577.1| 40S ribosomal protein S20-2 [Medicago trunca...    61   3e-07
gb|AFK45945.1| unknown [Lotus japonicus]                               60   5e-07
ref|XP_003596745.1| 40S ribosomal protein S20 [Medicago truncatu...    60   5e-07
ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago trunca...    60   6e-07

>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/105 (33%), Positives = 54/105 (51%)
 Frame = +2

Query: 269 KQQFQNIRFLIYSRFLMRLDEVVDAIIRNAKGMHLMVWGPHILPTKVVNVTRRLAPSPKG 448
           ++Q   IR  + S+ +  L++V   ++R AK  HL V GP  +PTKV+N+T R +P  +G
Sbjct: 17  QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLNITTRKSPCGEG 76

Query: 449 FNVERDSELHFHKRXXXXXXXXXXXXQILSGVRKTHVDIDVEVVD 583
            N     EL  HKR            QI S   +  V+++V + D
Sbjct: 77  TNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 121


>ref|XP_003605577.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|355506632|gb|AES87774.1| 40S ribosomal protein S20-2
           [Medicago truncatula] gi|388508260|gb|AFK42196.1|
           unknown [Medicago truncatula]
          Length = 122

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/105 (32%), Positives = 53/105 (50%)
 Frame = +2

Query: 269 KQQFQNIRFLIYSRFLMRLDEVVDAIIRNAKGMHLMVWGPHILPTKVVNVTRRLAPSPKG 448
           ++Q   IR  + S+ +  L++V   ++R AK  HL V GP  +PTKV+++T R  P  +G
Sbjct: 17  QEQIHKIRITLSSKHVQNLEKVCSDLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEG 76

Query: 449 FNVERDSELHFHKRXXXXXXXXXXXXQILSGVRKTHVDIDVEVVD 583
            N     EL  HKR            QI S   +  V+++V + D
Sbjct: 77  TNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 121


>gb|AFK45945.1| unknown [Lotus japonicus]
          Length = 122

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 35/104 (33%), Positives = 52/104 (50%)
 Frame = +2

Query: 272 QQFQNIRFLIYSRFLMRLDEVVDAIIRNAKGMHLMVWGPHILPTKVVNVTRRLAPSPKGF 451
           +Q   IR  + S+ +  L++V   +IR AK   L V GP  +PTKV+N+T R +P  +G 
Sbjct: 18  EQIHKIRITLSSKHVQNLEKVCSDLIRGAKDKRLRVKGPVRIPTKVLNITTRKSPCGEGT 77

Query: 452 NVERDSELHFHKRXXXXXXXXXXXXQILSGVRKTHVDIDVEVVD 583
           N     EL  HKR            QI S   +  V+++V + D
Sbjct: 78  NTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 121


>ref|XP_003596745.1| 40S ribosomal protein S20 [Medicago truncatula]
           gi|355485793|gb|AES66996.1| 40S ribosomal protein S20
           [Medicago truncatula] gi|388500198|gb|AFK38165.1|
           unknown [Medicago truncatula]
          Length = 123

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 34/105 (32%), Positives = 53/105 (50%)
 Frame = +2

Query: 269 KQQFQNIRFLIYSRFLMRLDEVVDAIIRNAKGMHLMVWGPHILPTKVVNVTRRLAPSPKG 448
           ++Q   IR  + S+ +  L++V   ++R AK  HL V GP  +PTKV+++T R  P  +G
Sbjct: 18  QEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEG 77

Query: 449 FNVERDSELHFHKRXXXXXXXXXXXXQILSGVRKTHVDIDVEVVD 583
            N     EL  HKR            QI S   +  V+++V + D
Sbjct: 78  TNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 122


>ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|124360667|gb|ABN08656.1| Ribosomal protein S10,
           eukaryotic and archaeal form [Medicago truncatula]
           gi|355500231|gb|AES81434.1| 40S ribosomal protein S20-2
           [Medicago truncatula]
          Length = 122

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 34/105 (32%), Positives = 53/105 (50%)
 Frame = +2

Query: 269 KQQFQNIRFLIYSRFLMRLDEVVDAIIRNAKGMHLMVWGPHILPTKVVNVTRRLAPSPKG 448
           ++Q   IR  + S+ +  L++V   ++R AK  HL V GP  +PTKV+++T R  P  +G
Sbjct: 17  QEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEG 76

Query: 449 FNVERDSELHFHKRXXXXXXXXXXXXQILSGVRKTHVDIDVEVVD 583
            N     EL  HKR            QI S   +  V+++V + D
Sbjct: 77  TNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 121


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