BLASTX nr result

ID: Angelica22_contig00012492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012492
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   206   2e-58
gb|ABK94132.1| unknown [Populus trichocarpa]                          199   1e-55
ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|2...   196   8e-55
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ...   197   1e-54
gb|AFK37234.1| unknown [Lotus japonicus]                              198   2e-53

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2, mitochondrial;
            AltName: Full=Protein WHIRLY 2; Short=StWHY2; Flags:
            Precursor gi|298359665|gb|ADI77438.1| Why2 protein
            [Solanum tuberosum]
          Length = 238

 Score =  206 bits (523), Expect(2) = 2e-58
 Identities = 107/175 (61%), Positives = 126/175 (72%)
 Frame = -1

Query: 1005 GKMSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTXXXXXXXXXXXXXXXX 826
            GK   RVFA Y+++KGK ALSA PRLP F +LDSGG K++R+G                 
Sbjct: 51   GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGV---------------- 94

Query: 825  XXXXXKVDRQGTIMLSFSPAIGERKYDWEKKQLFALSPTEVGSLISLGPDDTCEFFHDPS 646
                        IML+F P++GERKYDWEK+QLFALS TEVGSLIS+G  D+ EFFHDPS
Sbjct: 95   ------------IMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPS 142

Query: 645  MKSSNAGQVRKTLQVKPYADGTGYFISLSVVNNILKISERFTIPVTRAEFAVMRT 481
            M SSNAGQVRK+L +KP ADG+GYFISLSVVNN LK ++RFT+PVT AEFAVMRT
Sbjct: 143  MLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRT 197



 Score = 47.8 bits (112), Expect(2) = 2e-58
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = -2

Query: 386 FVLPHILGWDQYTNQSSKTLKEDTPMVDPRVQNLEWDR 273
           F LPHI+GWD++TN+ S+++ +    V P++   EWDR
Sbjct: 201 FALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  199 bits (506), Expect(2) = 1e-55
 Identities = 102/173 (58%), Positives = 122/173 (70%)
 Frame = -1

Query: 999 MSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTXXXXXXXXXXXXXXXXXX 820
           + DRVFA Y+++KGK ALS  P LP F K  SG  +VDR+G+                  
Sbjct: 44  IQDRVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGS------------------ 85

Query: 819 XXXKVDRQGTIMLSFSPAIGERKYDWEKKQLFALSPTEVGSLISLGPDDTCEFFHDPSMK 640
                     +ML+F PAIGERKYD+EK+Q FALS TEVGSLIS GP D+CEFFHDPSM 
Sbjct: 86  ----------MMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSML 135

Query: 639 SSNAGQVRKTLQVKPYADGTGYFISLSVVNNILKISERFTIPVTRAEFAVMRT 481
           SSNAGQVRK L +KP+ADG+GYF+SLSVVNNILK +ERFT+PVT AEF V++T
Sbjct: 136 SSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKT 188



 Score = 44.7 bits (104), Expect(2) = 1e-55
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -2

Query: 386 FVLPHILGWDQYTNQSSKTLKEDTPMVDPRVQNLEWDR 273
           F LPHI+GWD+ T     TL      VDP++ +LEWD+
Sbjct: 192 FALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLEWDK 229


>ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|222840745|gb|EEE78292.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  196 bits (499), Expect(2) = 8e-55
 Identities = 101/170 (59%), Positives = 120/170 (70%)
 Frame = -1

Query: 990 RVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTXXXXXXXXXXXXXXXXXXXXX 811
           RVFA Y+++KGK ALS  P LP F K  SG  +VDR+G+                     
Sbjct: 1   RVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGS--------------------- 39

Query: 810 KVDRQGTIMLSFSPAIGERKYDWEKKQLFALSPTEVGSLISLGPDDTCEFFHDPSMKSSN 631
                  +ML+F PAIGERKYD+EK+Q FALS TEVGSLIS GP D+CEFFHDPSM SSN
Sbjct: 40  -------MMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSN 92

Query: 630 AGQVRKTLQVKPYADGTGYFISLSVVNNILKISERFTIPVTRAEFAVMRT 481
           AGQVRK L +KP+ADG+GYF+SLSVVNNILK +ERFT+PVT AEF V++T
Sbjct: 93  AGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKT 142



 Score = 44.7 bits (104), Expect(2) = 8e-55
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -2

Query: 386 FVLPHILGWDQYTNQSSKTLKEDTPMVDPRVQNLEWDR 273
           F LPHI+GWD+ T     TL      VDP++ +LEWD+
Sbjct: 146 FALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLEWDK 183


>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
            gi|355501485|gb|AES82688.1| hypothetical protein
            MTR_7g116270 [Medicago truncatula]
            gi|388497124|gb|AFK36628.1| unknown [Medicago truncatula]
          Length = 226

 Score =  197 bits (502), Expect(2) = 1e-54
 Identities = 101/175 (57%), Positives = 123/175 (70%)
 Frame = -1

Query: 1005 GKMSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTXXXXXXXXXXXXXXXX 826
            G  SDR+FA Y++YKGK A S SP LP F KLDSG   VDR G+                
Sbjct: 41   GYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRHGS---------------- 84

Query: 825  XXXXXKVDRQGTIMLSFSPAIGERKYDWEKKQLFALSPTEVGSLISLGPDDTCEFFHDPS 646
                        IM+SF PAIGERKYDWEK+Q+FALS TEVGSLI++GP D+CEFFHDPS
Sbjct: 85   ------------IMMSFMPAIGERKYDWEKRQIFALSATEVGSLIAIGPQDSCEFFHDPS 132

Query: 645  MKSSNAGQVRKTLQVKPYADGTGYFISLSVVNNILKISERFTIPVTRAEFAVMRT 481
            MKSSNAGQVRK+L +KP+++  GYF+SLSVVN++L   + F++PVT AEFAVM+T
Sbjct: 133  MKSSNAGQVRKSLSIKPHSN--GYFVSLSVVNSVLNTKDNFSVPVTTAEFAVMKT 185



 Score = 42.7 bits (99), Expect(2) = 1e-54
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = -2

Query: 386 FVLPHILGWDQYTNQSSKTLKEDTPMVDPRVQNLEWDR 273
           F LPHI+GWD+ TNQ S       P ++ ++ +LEW++
Sbjct: 189 FALPHIMGWDRLTNQQSSGTVSFQPKMNSQILDLEWEK 226


>gb|AFK37234.1| unknown [Lotus japonicus]
          Length = 235

 Score =  198 bits (503), Expect(2) = 2e-53
 Identities = 100/175 (57%), Positives = 122/175 (69%)
 Frame = -1

Query: 1005 GKMSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTXXXXXXXXXXXXXXXX 826
            G  +DRVFA Y +YKGK A+S SP LP F KLDSG   V+R+G+                
Sbjct: 45   GYTTDRVFAPYYVYKGKAAMSLSPVLPTFTKLDSGALVVERRGS---------------- 88

Query: 825  XXXXXKVDRQGTIMLSFSPAIGERKYDWEKKQLFALSPTEVGSLISLGPDDTCEFFHDPS 646
                        IM+ F+PAIGERKYDWEK+Q FALS TEVGSLI++GP D+CEFFHDPS
Sbjct: 89   ------------IMMVFTPAIGERKYDWEKRQKFALSATEVGSLIAMGPQDSCEFFHDPS 136

Query: 645  MKSSNAGQVRKTLQVKPYADGTGYFISLSVVNNILKISERFTIPVTRAEFAVMRT 481
            M SSNAGQVRK+L +KP+A+ +GYF+SL+VVNN+L   E F +PVT AEFAVM+T
Sbjct: 137  MSSSNAGQVRKSLSIKPHANSSGYFVSLTVVNNLLNAKENFNVPVTTAEFAVMKT 191



 Score = 38.5 bits (88), Expect(2) = 2e-53
 Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = -2

Query: 386 FVLPHILGWDQYTNQSSKTLKEDT----PMVDPRVQNLEWDR 273
           F LPHI+GWD+ TNQ S +L   T      VD  V +LEWD+
Sbjct: 195 FALPHIMGWDRLTNQQS-SLPGGTVGLQSKVDKPVFDLEWDK 235


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