BLASTX nr result

ID: Angelica22_contig00012448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012448
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   164   7e-39
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   164   7e-39
ref|XP_004165443.1| PREDICTED: transcription initiation factor T...   152   2e-35
ref|XP_004137463.1| PREDICTED: transcription initiation factor T...   152   2e-35

>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
           predicted protein [Populus trichocarpa]
          Length = 1359

 Score =  169 bits (428), Expect = 2e-40
 Identities = 92/171 (53%), Positives = 119/171 (69%), Gaps = 21/171 (12%)
 Frame = -1

Query: 452 YLSSINRELLPNLLIMCAS---------------DGLP---EFKQNSKLIRIEYWVDKPQ 327
           YLS++ RE +PNLLI C                 +G+P   E KQN KL+RI YWV+K +
Sbjct: 107 YLSALERERVPNLLINCCKAFRVPNEVQEIVNLENGVPFSGEPKQNVKLVRINYWVEKAE 166

Query: 326 TGICFTKDVVYIDNQ---TRCWFPCMDNDDLQCCGYHLEFTVPNNLLAASTGTLLYSVLN 156
           TGI F  +VV+ DNQ    RCWFPCMD    +CC Y LEFTV +NL+A STG+LLY VL+
Sbjct: 167 TGIHFDNEVVHTDNQIRRARCWFPCMDEGFQRCC-YDLEFTVAHNLVAVSTGSLLYQVLS 225

Query: 155 EDEYPTHKTYVYRVDVPVSARLISLVVAPFEIIPDNTNNCCVLSYMCLPNN 3
           +D+ P HKT+VYR+DVPV+A+ ISLVVAPFEI+PD   +  ++S+MCLP+N
Sbjct: 226 KDD-PPHKTFVYRLDVPVTAQWISLVVAPFEILPD--PHVALISHMCLPSN 273


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  164 bits (415), Expect = 7e-39
 Identities = 89/171 (52%), Positives = 117/171 (68%), Gaps = 21/171 (12%)
 Frame = -1

Query: 452 YLSSINRELLPNLLIMCAS---------------DGLP---EFKQNSKLIRIEYWVDKPQ 327
           Y+S++ REL PNLLIMC                 +GL    E KQN KL+R++YWV++ +
Sbjct: 109 YVSALERELDPNLLIMCCKPEKSASEQQGQQSLENGLHSSGEPKQNVKLVRVDYWVERAE 168

Query: 326 TGICFTKDVVYIDNQ---TRCWFPCMDNDDLQCCGYHLEFTVPNNLLAASTGTLLYSVLN 156
           TGI F  +V++ DNQ    RCWFPCMD D  QCC Y LEFTV +NL+A STG+LLY VL+
Sbjct: 169 TGIHFEDNVLHTDNQIRRARCWFPCMD-DTSQCCCYDLEFTVAHNLVAVSTGSLLYQVLS 227

Query: 155 EDEYPTHKTYVYRVDVPVSARLISLVVAPFEIIPDNTNNCCVLSYMCLPNN 3
           +D+ P  KTYVY+++VPV+AR I L VAPFE++PD  +   +LSY+CLP N
Sbjct: 228 KDD-PPRKTYVYKLNVPVTARWIQLAVAPFEVLPDRHSG--LLSYLCLPAN 275


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  164 bits (415), Expect = 7e-39
 Identities = 89/171 (52%), Positives = 117/171 (68%), Gaps = 21/171 (12%)
 Frame = -1

Query: 452 YLSSINRELLPNLLIMCAS---------------DGLP---EFKQNSKLIRIEYWVDKPQ 327
           Y+S++ REL PNLLIMC                 +GL    E KQN KL+R++YWV++ +
Sbjct: 109 YVSALERELDPNLLIMCCKPEKSASEQQGQQSLENGLHSSGEPKQNVKLVRVDYWVERAE 168

Query: 326 TGICFTKDVVYIDNQ---TRCWFPCMDNDDLQCCGYHLEFTVPNNLLAASTGTLLYSVLN 156
           TGI F  +V++ DNQ    RCWFPCMD D  QCC Y LEFTV +NL+A STG+LLY VL+
Sbjct: 169 TGIHFEDNVLHTDNQIRRARCWFPCMD-DTSQCCCYDLEFTVAHNLVAVSTGSLLYQVLS 227

Query: 155 EDEYPTHKTYVYRVDVPVSARLISLVVAPFEIIPDNTNNCCVLSYMCLPNN 3
           +D+ P  KTYVY+++VPV+AR I L VAPFE++PD  +   +LSY+CLP N
Sbjct: 228 KDD-PPRKTYVYKLNVPVTARWIQLAVAPFEVLPDRHSG--LLSYLCLPAN 275


>ref|XP_004165443.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           [Cucumis sativus]
          Length = 1362

 Score =  152 bits (385), Expect = 2e-35
 Identities = 86/171 (50%), Positives = 106/171 (61%), Gaps = 21/171 (12%)
 Frame = -1

Query: 452 YLSSINRELLPNLLIMCAS------------------DGLPEFKQNSKLIRIEYWVDKPQ 327
           YLSSI +EL+PNLLI C                        E KQN +L+RI+YWV+K +
Sbjct: 108 YLSSIEKELVPNLLINCCKAFKSGSEQQDQPFLENGVQTADEDKQNVRLVRIDYWVEKSE 167

Query: 326 TGICFTKDVVYIDNQ---TRCWFPCMDNDDLQCCGYHLEFTVPNNLLAASTGTLLYSVLN 156
            GI F   + + DNQ    RCWFPCMD D LQ C Y LEFTV  NL+A S G LLY VL+
Sbjct: 168 VGIHFYNRMAHTDNQIRRARCWFPCMD-DGLQRCKYDLEFTVSQNLVAVSNGILLYQVLS 226

Query: 155 EDEYPTHKTYVYRVDVPVSARLISLVVAPFEIIPDNTNNCCVLSYMCLPNN 3
           +D  P  KT+VYRVD+PV+AR ISL V PFEI+ D+ N   ++S+MC P N
Sbjct: 227 KDN-PPRKTFVYRVDIPVNARWISLAVGPFEILADHQN--VLISHMCSPVN 274


>ref|XP_004137463.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           [Cucumis sativus]
          Length = 1362

 Score =  152 bits (385), Expect = 2e-35
 Identities = 86/171 (50%), Positives = 106/171 (61%), Gaps = 21/171 (12%)
 Frame = -1

Query: 452 YLSSINRELLPNLLIMCAS------------------DGLPEFKQNSKLIRIEYWVDKPQ 327
           YLSSI +EL+PNLLI C                        E KQN +L+RI+YWV+K +
Sbjct: 108 YLSSIEKELVPNLLINCCKAFKSGSEQQDQPFLENGVQTADEDKQNVRLVRIDYWVEKSE 167

Query: 326 TGICFTKDVVYIDNQ---TRCWFPCMDNDDLQCCGYHLEFTVPNNLLAASTGTLLYSVLN 156
            GI F   + + DNQ    RCWFPCMD D LQ C Y LEFTV  NL+A S G LLY VL+
Sbjct: 168 VGIHFYNRMAHTDNQIRRARCWFPCMD-DGLQRCKYDLEFTVSQNLVAVSNGILLYQVLS 226

Query: 155 EDEYPTHKTYVYRVDVPVSARLISLVVAPFEIIPDNTNNCCVLSYMCLPNN 3
           +D  P  KT+VYRVD+PV+AR ISL V PFEI+ D+ N   ++S+MC P N
Sbjct: 227 KDN-PPRKTFVYRVDIPVNARWISLAVGPFEILADHQN--VLISHMCSPVN 274


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