BLASTX nr result

ID: Angelica22_contig00012438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012438
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529459.1| Cell differentiation protein rcd1, putative ...    67   2e-09
ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004139793.1| PREDICTED: cell differentiation protein RCD1...    64   1e-08
ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AAM61591.1| putative cell differentiation protein [Arabidopsi...    60   1e-07

>ref|XP_002529459.1| Cell differentiation protein rcd1, putative [Ricinus communis]
           gi|223531075|gb|EEF32925.1| Cell differentiation protein
           rcd1, putative [Ricinus communis]
          Length = 328

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/60 (65%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = -2

Query: 173 MANLPQSLSINXXXXXXXXXXXSE---PANKDRKMQTAEQLVLDLSNPDDRENALLELSK 3
           MANLPQSLS+N           +    PANKDRKM +AE LVLDLSNPD RENALLELSK
Sbjct: 1   MANLPQSLSMNAQFGGPSASTPTAAGAPANKDRKMASAEHLVLDLSNPDLRENALLELSK 60


>ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|222860390|gb|EEE97937.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/61 (63%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
 Frame = -2

Query: 173 MANLPQSLSINXXXXXXXXXXXSE----PANKDRKMQTAEQLVLDLSNPDDRENALLELS 6
           MANLPQSLS+N           +     PANKDRKM +AE LVLDLSNPD RENALLELS
Sbjct: 1   MANLPQSLSMNTPFGGPSASNPAAAAGAPANKDRKMASAEHLVLDLSNPDLRENALLELS 60

Query: 5   K 3
           K
Sbjct: 61  K 61


>ref|XP_004139793.1| PREDICTED: cell differentiation protein RCD1 homolog [Cucumis
           sativus] gi|449517076|ref|XP_004165572.1| PREDICTED:
           cell differentiation protein RCD1 homolog [Cucumis
           sativus]
          Length = 319

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/60 (61%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -2

Query: 173 MANLPQSLSINXXXXXXXXXXXSE---PANKDRKMQTAEQLVLDLSNPDDRENALLELSK 3
           MANLPQSLS+N                P NK+RKM ++EQLVLDLSNPD RENALLELSK
Sbjct: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60


>ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|222846102|gb|EEE83649.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
 Frame = -2

Query: 173 MANLPQSLSINXXXXXXXXXXXSE------PANKDRKMQTAEQLVLDLSNPDDRENALLE 12
           MANLPQSLS+N           +       PANKDRKM +AE LVLDLS+PD RENALLE
Sbjct: 1   MANLPQSLSMNAPFGVPSASNPASAAVAGAPANKDRKMASAEHLVLDLSSPDLRENALLE 60

Query: 11  LSK 3
           LSK
Sbjct: 61  LSK 63


>gb|AAM61591.1| putative cell differentiation protein [Arabidopsis thaliana]
          Length = 316

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -2

Query: 173 MANLPQSLSINXXXXXXXXXXXSE---PANKDRKMQTAEQLVLDLSNPDDRENALLELSK 3
           MANLP SLS++           +    PANKDR + +AEQLVLDLSNP+ RENALLELSK
Sbjct: 1   MANLPSSLSMSTPFGGPSTSAQNPTGAPANKDRNLASAEQLVLDLSNPELRENALLELSK 60


Top