BLASTX nr result

ID: Angelica22_contig00012247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012247
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   469   e-130
gb|ABK95213.1| unknown [Populus trichocarpa]                          440   e-121
ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   434   e-119
gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]    430   e-118

>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis vinifera]
            gi|297736812|emb|CBI26013.3| unnamed protein product
            [Vitis vinifera]
          Length = 307

 Score =  469 bits (1208), Expect = e-130
 Identities = 234/315 (74%), Positives = 260/315 (82%)
 Frame = -3

Query: 1293 MSAASRGLISHLRHISLSPKPTNSLSTSIYALTQLRSLCSGSLIDETQERFSGIEAKHGI 1114
            MSAASRGLIS  R +S+ P+     +++I A  Q R   S SLIDE       I  K G+
Sbjct: 1    MSAASRGLISGFRFLSIGPR-----TSAIVASYQFRRFGSESLIDEEPRI---IVPKPGV 52

Query: 1113 MKPNSRRTGLIAVKCGMSALWDKWGKRVPISVLWVDDNVVSQVKTPENEGITALQIGCGH 934
            M PNS+RTG IAVKCGMSALWDKWG RVPI+VLW+DDN+VSQVKT E EG+ ALQ+GCG 
Sbjct: 53   MSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQ 112

Query: 933  KKEKHLTKPEVGHFRAQGVPMKRKLKEFPVTGDALLPLGMSLGVRHFVPGQYVDVTGITR 754
            KK KHLTKPEVGHFRAQGVP+KRKL+EFPVT DALLP+G ++GVRHFVPGQYVDVTGITR
Sbjct: 113  KKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQYVDVTGITR 172

Query: 753  GKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKN 574
            GKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVF           KQRTVKN
Sbjct: 173  GKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKN 232

Query: 573  VWVYKIEPARNLIYVRGQVPGATGNFVFIKDAVYKKTDASLLPFPTYFAPEDEDSTTLKP 394
            VWVYKI+P RNL++VRGQVPGA GNFVFIKDAVYKK DAS+LPFPTYF  EDED T L+P
Sbjct: 233  VWVYKIDPTRNLMWVRGQVPGAEGNFVFIKDAVYKKPDASILPFPTYFPAEDEDPTVLEP 292

Query: 393  LIADLGDVDPFMVAD 349
            ++ADLGD+DPFMVAD
Sbjct: 293  IVADLGDIDPFMVAD 307


>gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  440 bits (1131), Expect = e-121
 Identities = 222/319 (69%), Positives = 254/319 (79%), Gaps = 4/319 (1%)
 Frame = -3

Query: 1293 MSAASRGLISHLRHISLSPKPTNSLSTSIYALTQLRSLCSGSLIDETQERFSG----IEA 1126
            MSA SRGLIS L  I  +   T   +T+ + L  LR   + +LID +Q  +      IEA
Sbjct: 1    MSALSRGLISRLYRILSANSRTPPTATTKFYL--LRCFSADALIDGSQVEYHQQSRIIEA 58

Query: 1125 KHGIMKPNSRRTGLIAVKCGMSALWDKWGKRVPISVLWVDDNVVSQVKTPENEGITALQI 946
            K G+M PNS+RTG++AVKCGM+ALWDKWG R+PI+VLWVDDN+VSQVKT E EG  ALQ+
Sbjct: 59   KPGVMTPNSKRTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQV 118

Query: 945  GCGHKKEKHLTKPEVGHFRAQGVPMKRKLKEFPVTGDALLPLGMSLGVRHFVPGQYVDVT 766
            GCG KKEKHLTKPEVGHFRAQGVPMKRKL+EFPVT DALLP+G  +GVRHFVPGQ+VDV 
Sbjct: 119  GCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTYVGVRHFVPGQFVDVA 178

Query: 765  GITRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXXXXXXXKQR 586
            GIT GKGFQGGMKR GFKG PASHGASLSHRSIGSTGQRDAPGKVF            QR
Sbjct: 179  GITMGKGFQGGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQR 238

Query: 585  TVKNVWVYKIEPARNLIYVRGQVPGATGNFVFIKDAVYKKTDASLLPFPTYFAPEDEDST 406
            TVKNVWVYKI+PARNL++V+GQVPGA GNFVFIKD+VYKK D  +LPFPTYF  ED+D+ 
Sbjct: 239  TVKNVWVYKIDPARNLMWVKGQVPGAEGNFVFIKDSVYKKPDIQMLPFPTYFGAEDDDNA 298

Query: 405  TLKPLIADLGDVDPFMVAD 349
              +PL+ADLG+VDPFMVAD
Sbjct: 299  --EPLVADLGEVDPFMVAD 315


>ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  439 bits (1130), Expect = e-121
 Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 8/323 (2%)
 Frame = -3

Query: 1293 MSAASRGLISHLRHI-SLSPKPTNSLSTSIYALTQL---RSLCSGSLIDETQERFSG--- 1135
            M A SRGLIS L  I SL+ + T S S  I A TQL   R   S +L+D ++ ++     
Sbjct: 1    MPALSRGLISRLHQILSLNSRTTQSASPPI-ATTQLYLLRRFSSDALVDGSEIQYQQPSR 59

Query: 1134 -IEAKHGIMKPNSRRTGLIAVKCGMSALWDKWGKRVPISVLWVDDNVVSQVKTPENEGIT 958
             IEAK G+M PNS+RTG+IAVKCGM+ALWDKWG R+PI+VLWVDDN+VSQVKT E EG  
Sbjct: 60   IIEAKPGVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFF 119

Query: 957  ALQIGCGHKKEKHLTKPEVGHFRAQGVPMKRKLKEFPVTGDALLPLGMSLGVRHFVPGQY 778
            ALQ+GCG KKEKHLTKPEVGHFRAQGVPMKRKL+EFPVT +ALLP+G  +GVRHFVPGQ+
Sbjct: 120  ALQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTENALLPVGTCIGVRHFVPGQF 179

Query: 777  VDVTGITRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXXXXXX 598
            VDV GIT GKGFQGGMKR GFKG PASHGASLSHRSIGSTGQRDAPGKVF          
Sbjct: 180  VDVAGITMGKGFQGGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMG 239

Query: 597  XKQRTVKNVWVYKIEPARNLIYVRGQVPGATGNFVFIKDAVYKKTDASLLPFPTYFAPED 418
              QRTVKNVWVYKI+PARNL++V+GQVPGA GNFVFIKD+V+KK D  +LPFPTYF  ED
Sbjct: 240  GVQRTVKNVWVYKIDPARNLMWVKGQVPGAEGNFVFIKDSVFKKPDIQILPFPTYFETED 299

Query: 417  EDSTTLKPLIADLGDVDPFMVAD 349
            +D++  +PL+ADLG+VDPFMVAD
Sbjct: 300  DDNS--EPLVADLGEVDPFMVAD 320


>ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
            max]
          Length = 300

 Score =  434 bits (1116), Expect = e-119
 Identities = 219/317 (69%), Positives = 245/317 (77%), Gaps = 2/317 (0%)
 Frame = -3

Query: 1293 MSAASRGLISHLRHISL--SPKPTNSLSTSIYALTQLRSLCSGSLIDETQERFSGIEAKH 1120
            M A SRGL+S L+  ++  SP P  SLS+   A+               Q R   IE K 
Sbjct: 1    MLALSRGLVSRLQRFAVDSSPSPLRSLSSDAAAI---------------QTRI--IEPKP 43

Query: 1119 GIMKPNSRRTGLIAVKCGMSALWDKWGKRVPISVLWVDDNVVSQVKTPENEGITALQIGC 940
             +M PNS+RTGLIAVKCGMSALWDKWG R+PI+VLWVDDN+VSQVKTPE EG  ALQIGC
Sbjct: 44   SVMTPNSKRTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGC 103

Query: 939  GHKKEKHLTKPEVGHFRAQGVPMKRKLKEFPVTGDALLPLGMSLGVRHFVPGQYVDVTGI 760
            GHKK+KHLTKPEVGHFRAQGVPMKRKLKEFPVT DALLP+G SL VRHFVPGQYVD+TGI
Sbjct: 104  GHKKDKHLTKPEVGHFRAQGVPMKRKLKEFPVTEDALLPVGTSLNVRHFVPGQYVDITGI 163

Query: 759  TRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXXXXXXXKQRTV 580
            T+GKGFQG MKR GF G PASHG SL+HR++GS G   + GKVF            QRTV
Sbjct: 164  TKGKGFQGVMKRHGFSGGPASHGNSLAHRTLGSVGHLTSHGKVFKNKKMPGRMGGDQRTV 223

Query: 579  KNVWVYKIEPARNLIYVRGQVPGATGNFVFIKDAVYKKTDASLLPFPTYFAPEDEDSTTL 400
            KNVWVYKI+PARNL++V+GQVPGATGNFVFIKDAVY+K D SLLPFPTYF PEDED   L
Sbjct: 224  KNVWVYKIDPARNLMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVPEDEDIDNL 283

Query: 399  KPLIADLGDVDPFMVAD 349
            KPL+A+LGDVDPFMV D
Sbjct: 284  KPLVAELGDVDPFMVTD 300


>gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]
          Length = 328

 Score =  430 bits (1105), Expect = e-118
 Identities = 219/328 (66%), Positives = 259/328 (78%), Gaps = 13/328 (3%)
 Frame = -3

Query: 1293 MSAASRGLISHLRHISLSPKPTNSLSTSIYALTQ---------LRSLCSGSLI---DETQ 1150
            MSA SRGLIS LR +S++   ++S+++S Y+ +           R+  +  L    D + 
Sbjct: 1    MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 1149 ERFSGIEAKHGIMKPNSRRTGLIAVKCGMSALWDKWGKRVPISVLWVDDNVVSQVKTPEN 970
               S IEAK G M  NSRRTG+IAVKCGMSALWDKWG R+PI+VLWVDDN+VSQVKT E 
Sbjct: 61   PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 969  EGITALQIGCGHKKEKHLTKPEVGHFRAQGVPMKRKLKEFPVTGDALLPLGMSLGVRHFV 790
            EGITALQIGCG KKEKHL+KPE+GHFRAQGVP+KRKLKEFPV+ DALLP+G  +G RHFV
Sbjct: 121  EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 789  PGQYVDVTGITRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXX 610
            PGQYVDVTGI+RGKGFQG MKR GFKGMPASHGASLSHRS GSTGQRDAPGKVF      
Sbjct: 181  PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 609  XXXXXKQRTVKNVWVYKIEPARNLIYVRGQVPGATGNFVFIKDAVYKKTDAS-LLPFPTY 433
                 KQRTVKNVW+YKI+PARNLI+V+G +PGA G+FVFIKDA+YK+ + S +LPFPTY
Sbjct: 241  GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 432  FAPEDEDSTTLKPLIADLGDVDPFMVAD 349
            FA + ED+  L+PL+ADLG+VDPFM+ D
Sbjct: 301  FATDGEDTDKLEPLVADLGEVDPFMIGD 328


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