BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012237
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   376   e-102
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   363   4e-98
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   357   3e-96
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   348   9e-94
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   345   1e-92

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  376 bits (966), Expect = e-102
 Identities = 200/268 (74%), Positives = 215/268 (80%)
 Frame = -3

Query: 944 MEIAKPANYSIDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNK 765
           ME   PA++ +D+ VVPGDVVLDLS M NQTIKLGGGL QDCD+IT  KAG LRFSKPNK
Sbjct: 1   MEDNTPASF-VDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNK 59

Query: 764 YWIESSQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTVLGIVVDSKADNF 585
           YW+ESSQKR                                    DTVLGIVVDSKADNF
Sbjct: 60  YWVESSQKRYVPCVE------------------------------DTVLGIVVDSKADNF 89

Query: 584 LVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLIYVRVVKANVGMNPELACMDASGKAAE 405
           LVDIKGPALAFLPVLAFEGGTRRNIPKFE GTL+YVRVVKAN GMNPEL+C DASGKAAE
Sbjct: 90  LVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANTGMNPELSCTDASGKAAE 149

Query: 404 FGPLKDGYMFESSTGLSRMLLSSPACPVLEALGKKLSFEIAVGLNGRVWVNAASPSTVIL 225
           FGPLKDGYMFESSTGLSRMLLSSP CPVLEALGKKLSFEIAVGLNGRVWVNA+SPSTVIL
Sbjct: 150 FGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNASSPSTVIL 209

Query: 224 VSSAIMNSETLTGVQQKLMVEKLLQRTQ 141
           V++AIMNSE+L+ VQQK+MV+KLLQR Q
Sbjct: 210 VANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  363 bits (932), Expect = 4e-98
 Identities = 191/263 (72%), Positives = 210/263 (79%)
 Frame = -3

Query: 929 PANYSIDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNKYWIES 750
           PA + ID  VVPGDVV+DLSSM+NQTIKLG GLRQDCD+I+ +KAG LRFSKPNKYW+E+
Sbjct: 9   PATF-IDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYWVET 67

Query: 749 SQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTVLGIVVDSKADNFLVDIK 570
           SQKR                                    D+VLGIVVDSK+DNFL+DIK
Sbjct: 68  SQKRYVPCAE------------------------------DSVLGIVVDSKSDNFLIDIK 97

Query: 569 GPALAFLPVLAFEGGTRRNIPKFEVGTLIYVRVVKANVGMNPELACMDASGKAAEFGPLK 390
           GPALAFLPVLAFEGGTRRNIPKFE GTL+YVRVVKAN GMNPEL+C DASGKAAEFG LK
Sbjct: 98  GPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALK 157

Query: 389 DGYMFESSTGLSRMLLSSPACPVLEALGKKLSFEIAVGLNGRVWVNAASPSTVILVSSAI 210
           DGYMFE STGLSRMLLSSP CPVLEALGKKLSFEIAVGLNGRVWVNA SPS VI+V++AI
Sbjct: 158 DGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAI 217

Query: 209 MNSETLTGVQQKLMVEKLLQRTQ 141
           MNSETL+GVQQK+M EKLLQ+ Q
Sbjct: 218 MNSETLSGVQQKIMAEKLLQKIQ 240


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  357 bits (916), Expect = 3e-96
 Identities = 182/256 (71%), Positives = 207/256 (80%)
 Frame = -3

Query: 914 IDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNKYWIESSQKRX 735
           +D+ V PGDV+LDLS+M+NQTIKLGGGLRQDCD+I+ +KAG LRFSKPNKYW+E+SQKR 
Sbjct: 13  VDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKPNKYWVENSQKRY 72

Query: 734 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTVLGIVVDSKADNFLVDIKGPALA 555
                                              D+VLGIVVDS++DNFLVDIKGPALA
Sbjct: 73  VPHAE------------------------------DSVLGIVVDSRSDNFLVDIKGPALA 102

Query: 554 FLPVLAFEGGTRRNIPKFEVGTLIYVRVVKANVGMNPELACMDASGKAAEFGPLKDGYMF 375
           FLPVLAFEGGTRRNIP+FE+GTLIY RVVKAN GMNPELAC DASGKAAEFG LKDGYMF
Sbjct: 103 FLPVLAFEGGTRRNIPRFEIGTLIYARVVKANPGMNPELACTDASGKAAEFGALKDGYMF 162

Query: 374 ESSTGLSRMLLSSPACPVLEALGKKLSFEIAVGLNGRVWVNAASPSTVILVSSAIMNSET 195
           E +TGLSRMLLSSP CPVL+ALGKKLSFEIAVGLNGRVWV+AASP T I+V++AIMNSET
Sbjct: 163 ECTTGLSRMLLSSPTCPVLDALGKKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSET 222

Query: 194 LTGVQQKLMVEKLLQR 147
           L+G QQ++MVEKLL+R
Sbjct: 223 LSGAQQRIMVEKLLER 238


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  348 bits (894), Expect = 9e-94
 Identities = 183/265 (69%), Positives = 209/265 (78%), Gaps = 3/265 (1%)
 Frame = -3

Query: 938 IAKPANYS---IDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPN 768
           + KP++ S   +D+PVVPGDVVLDLS+M+N+TIKLGGGLRQD D+I+  K G LRFSKPN
Sbjct: 2   VEKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPN 61

Query: 767 KYWIESSQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTVLGIVVDSKADN 588
           KYW+ESSQKR                                    D VLGIV+DS+ADN
Sbjct: 62  KYWVESSQKRYVPCAE------------------------------DCVLGIVLDSRADN 91

Query: 587 FLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLIYVRVVKANVGMNPELACMDASGKAA 408
           FLVDIKGP+LAFLPVLAFEGGTRRNIPKFE+G L+YVRVVK N GMNPELAC DASGKAA
Sbjct: 92  FLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGALLYVRVVKVNPGMNPELACTDASGKAA 151

Query: 407 EFGPLKDGYMFESSTGLSRMLLSSPACPVLEALGKKLSFEIAVGLNGRVWVNAASPSTVI 228
            FG LKDGYMFE STGLSRMLLSSP+CPVLE+LGKKLSFE AVGLNGRVWVNA SPST+I
Sbjct: 152 GFGLLKDGYMFECSTGLSRMLLSSPSCPVLESLGKKLSFETAVGLNGRVWVNADSPSTII 211

Query: 227 LVSSAIMNSETLTGVQQKLMVEKLL 153
           +VS+AI+NSETL+GVQQ++MV+KLL
Sbjct: 212 VVSNAILNSETLSGVQQRIMVDKLL 236


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  345 bits (884), Expect = 1e-92
 Identities = 179/258 (69%), Positives = 202/258 (78%)
 Frame = -3

Query: 914 IDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNKYWIESSQKRX 735
           +D+ V PGDVVLDLS+M+NQTIKLGGGLRQD D I+ +KAG LRFSKPNKYW+ESSQKR 
Sbjct: 13  VDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKPNKYWVESSQKRY 72

Query: 734 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTVLGIVVDSKADNFLVDIKGPALA 555
                                              D+VLGI+VDS++DNFLVDIKGP LA
Sbjct: 73  VPHAE------------------------------DSVLGIIVDSRSDNFLVDIKGPTLA 102

Query: 554 FLPVLAFEGGTRRNIPKFEVGTLIYVRVVKANVGMNPELACMDASGKAAEFGPLKDGYMF 375
           FLPVLAFEGGTRRNIPKFEVG LIYVRVVKA  GMNPEL+C DASGKA EFG LK+GYMF
Sbjct: 103 FLPVLAFEGGTRRNIPKFEVGALIYVRVVKAIPGMNPELSCTDASGKAGEFGALKEGYMF 162

Query: 374 ESSTGLSRMLLSSPACPVLEALGKKLSFEIAVGLNGRVWVNAASPSTVILVSSAIMNSET 195
           E STGLSRMLLS+P CPVL+ LGKKLSFEIAVGLNGRVWVNA+SPST I+V++A++NSE 
Sbjct: 163 ECSTGLSRMLLSTPTCPVLDTLGKKLSFEIAVGLNGRVWVNASSPSTTIIVANALINSEV 222

Query: 194 LTGVQQKLMVEKLLQRTQ 141
           L+GVQQK+M EKLLQR Q
Sbjct: 223 LSGVQQKIMAEKLLQRVQ 240