BLASTX nr result

ID: Angelica22_contig00012091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00012091
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    77   1e-12
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    77   1e-12
emb|CBI16098.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    67   2e-09
ref|XP_002298344.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/56 (55%), Positives = 44/56 (78%)
 Frame = +3

Query: 159 TTTSYWCYRCTRFVRVSSTNGHVICPYCDSGFIEAVDSTPAPESQRRRFSAAEMYV 326
           +TTSYWC+RCTRFVRV + +  ++CPYC+SGF+E +++TP  E+  RRF A  MY+
Sbjct: 5   STTSYWCHRCTRFVRVWAQDS-IVCPYCESGFLEEIEATPRSENHHRRFPATAMYM 59


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/56 (55%), Positives = 44/56 (78%)
 Frame = +3

Query: 159 TTTSYWCYRCTRFVRVSSTNGHVICPYCDSGFIEAVDSTPAPESQRRRFSAAEMYV 326
           +TTSYWC+RCTRFVRV + +  ++CPYC+SGF+E +++TP  E+  RRF A  MY+
Sbjct: 115 STTSYWCHRCTRFVRVWAQDS-IVCPYCESGFLEEIEATPRSENHHRRFPATAMYM 169


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = +3

Query: 159 TTTSYWCYRCTRFVRVSSTNGHVICPYCDSGFIEAVDSTPAPESQRRR 302
           +TTSYWC+RCTRFVRV + +  ++CPYC+SGF+E +++TP  E+  RR
Sbjct: 173 STTSYWCHRCTRFVRVWAQDS-IVCPYCESGFLEEIEATPRSENHHRR 219


>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/96 (41%), Positives = 48/96 (50%), Gaps = 17/96 (17%)
 Frame = +3

Query: 147 IMSWTTTSYWCYRCTRFVRVSSTNGHVICPYCDSGFIEAVDSTPA-----PESQRRRFSA 311
           +MS  T+SYWCYRC+RFVRV   +  V+CP CD GFIE ++  P      P   R RF A
Sbjct: 2   MMSSGTSSYWCYRCSRFVRV-WPHHTVVCPDCDGGFIEEIEHPPRSVHLDPRRHRHRFPA 60

Query: 312 AEMYV------------SXXXXXXXXXXXXSPFNPV 383
           A MY+            S            SPFNPV
Sbjct: 61  AAMYMIGQRPSSDPRPASSLRRTRRNGGDRSPFNPV 96


>ref|XP_002298344.1| predicted protein [Populus trichocarpa] gi|222845602|gb|EEE83149.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +3

Query: 144 TIMSWTTTSYWCYRCTRFVRVSSTN--------GHVICPYCDSGFIEAVDSTPAPESQRR 299
           T+ S T TSYWCYRC RFV VS  N         ++ CP+CD GF+E + S       R 
Sbjct: 1   TMASTTATSYWCYRCARFVTVSPRNDDEEQNHANYITCPHCDGGFVEEIQSNNDNRRNRS 60

Query: 300 RFSAAEMYVSXXXXXXXXXXXXSPFNPV 383
           R       VS            SP+NPV
Sbjct: 61  R-------VSNFIRNRRNAGDRSPYNPV 81


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