BLASTX nr result
ID: Angelica22_contig00011990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00011990
(1670 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi... 655 0.0
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2... 616 e-174
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi... 606 e-171
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] 591 e-166
ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 569 e-160
>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 655 bits (1690), Expect = 0.0
Identities = 308/492 (62%), Positives = 386/492 (78%), Gaps = 3/492 (0%)
Frame = +3
Query: 6 IHGVLRKFGFGCELVLHNCLICMYCKCGLVEFGRQVFDKMGVRDSVSFNSMIDGYVKNGK 185
IHG+L + G ++ L NCL+C+Y +CG + RQ+FD+M RDSVSFNSMIDGYVK+G
Sbjct: 144 IHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGM 203
Query: 186 VELGREVFDSMPVELRNLVSWNCMICGYVHKFES---AWELFREMPDRDLISWNLMLDCC 356
V+ RE+FD MP+E +NL+SWN MI GY E AWELF EMP RDLISWN M+D C
Sbjct: 204 VKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGC 263
Query: 357 AKCGKMEVAFDLFSRMPKRDVISWANMIDGYGRLGCVDIARGLFDDMGERDVVSYNVMVA 536
KCGKME A LF++MPKRDV+SWANM+DGY +LG +DIARGLFD+M ERDV+S N M+A
Sbjct: 264 VKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMA 323
Query: 537 GYVQNGYFKEALELFHEMLRERKFCPDRTTLVIALSAIAQLGNIDEGIAVHQYLEKNGFI 716
GYVQNG+ EAL FH+ML ++ PD TL+I LSAIAQLG+ DEG+A+H Y+E NGF
Sbjct: 324 GYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 383
Query: 717 VEGKLGVALIDMYAKSGSIEIAMHVFENVEERTVDHWNXXXXXXXXXXXXDVAFGLFIEM 896
+ KLGVALIDMYAK GSI+ A+ VFE+++++++DHWN +VAF LF+EM
Sbjct: 384 LSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEM 443
Query: 897 ESLCVQPDDITFIGVLNACGHSGMVKEGMICFEIMSRIHKLEPKLHHYGCMVDILGRAGY 1076
E L V+PDDITFIGVLNAC H+G+VKEG++CFE+M R+HK+EPKL HYGCMVDILGRAG+
Sbjct: 444 EKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGH 503
Query: 1077 IEEAARFIQDMPIEPNDVVWRTLLSACKSYENLYIGEQVANYLIQRDPHNSGSYVLLSNM 1256
+EEA +F++ MPIEPNDVVWRTLLSAC+++EN IGE VA +LI D +N SYVLLSN+
Sbjct: 504 VEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNI 563
Query: 1257 YASFSMWDCVRNVRTRMKERELEKVPGCSWIELEGAVHEFFVGDRSHPQVQEIYSSLDKW 1436
YA F MW+ V +R MK+R+L+K+PGCS IELEG VHEFFV D+SHPQV+EIYS LD
Sbjct: 564 YAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSL 623
Query: 1437 HAINSEISCCKY 1472
A+NSE++ CK+
Sbjct: 624 SALNSEVAYCKH 635
>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
predicted protein [Populus trichocarpa]
Length = 643
Score = 616 bits (1588), Expect = e-174
Identities = 293/491 (59%), Positives = 372/491 (75%), Gaps = 3/491 (0%)
Frame = +3
Query: 6 IHGVLRKFGFGCELVLHNCLICMYCKCGLVEFGRQVFDKMGVRDSVSFNSMIDGYVKNGK 185
IHG+L+K FG +L L NCLI Y KCG + QVFD+M RDSVS+NSMIDGYVK G+
Sbjct: 149 IHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGR 208
Query: 186 VELGREVFDSMPVELRNLVSWNCMICGYVHKFES---AWELFREMPDRDLISWNLMLDCC 356
++L R VFD +P+E RNL+SWN +I GY + AW+LF +MP+RDLISWN M+D C
Sbjct: 209 IDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGC 268
Query: 357 AKCGKMEVAFDLFSRMPKRDVISWANMIDGYGRLGCVDIARGLFDDMGERDVVSYNVMVA 536
KCG+ME A LF RMP RD++SWANMIDGY + G VDIAR LFD+M ERDVV+YN M+
Sbjct: 269 VKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMG 328
Query: 537 GYVQNGYFKEALELFHEMLRERKFCPDRTTLVIALSAIAQLGNIDEGIAVHQYLEKNGFI 716
GYVQNGY EAL +F+ M + F D TL+IALSAIAQLG+ID+G+A+H+++E+ GF
Sbjct: 329 GYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFS 388
Query: 717 VEGKLGVALIDMYAKSGSIEIAMHVFENVEERTVDHWNXXXXXXXXXXXXDVAFGLFIEM 896
++G+LGVALIDMY+K GSIE AM VFEN++E++VDHWN ++AF +EM
Sbjct: 389 LDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEM 448
Query: 897 ESLCVQPDDITFIGVLNACGHSGMVKEGMICFEIMSRIHKLEPKLHHYGCMVDILGRAGY 1076
E + V+PDDITFIG+LNACGH+G+VKEGM+CFE+M R+HK+EPKL HYGCMVDILGRAG+
Sbjct: 449 ERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGH 508
Query: 1077 IEEAARFIQDMPIEPNDVVWRTLLSACKSYENLYIGEQVANYLIQRDPHNSGSYVLLSNM 1256
IEEA F+++MP EPNDV+WR+LLSACK++E+ +G+ VA L++ D + SYVL SNM
Sbjct: 509 IEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNM 568
Query: 1257 YASFSMWDCVRNVRTRMKERELEKVPGCSWIELEGAVHEFFVGDRSHPQVQEIYSSLDKW 1436
YA W+ VR VR MK++ L+K+PGCSWIELEG V+ FFV D+SHPQ IYS LD
Sbjct: 569 YAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSL 628
Query: 1437 HAINSEISCCK 1469
+SE S CK
Sbjct: 629 SMTDSEHSYCK 639
>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 606 bits (1563), Expect = e-171
Identities = 283/491 (57%), Positives = 371/491 (75%), Gaps = 3/491 (0%)
Frame = +3
Query: 6 IHGVLRKFGFGCELVLHNCLICMYCKCGLVEFGRQVFDKMGVRDSVSFNSMIDGYVKNGK 185
IHG+L K G L L NCLI MY +CG +EF RQVFD+M ++DSVS+NSMIDGYVK+G
Sbjct: 147 IHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGT 206
Query: 186 VELGREVFDSMPVELRNLVSWNCMICGYVHKFES---AWELFREMPDRDLISWNLMLDCC 356
++L RE+FDSMP+E +NL+SWN M+ G+ + A ELF +MP+RDL+SWN ++
Sbjct: 207 IDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGF 266
Query: 357 AKCGKMEVAFDLFSRMPKRDVISWANMIDGYGRLGCVDIARGLFDDMGERDVVSYNVMVA 536
AKCG++E A LF+RMPKRDVISW+NMIDGY +LG + +AR LFD+M ++DVV++N ++A
Sbjct: 267 AKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMA 326
Query: 537 GYVQNGYFKEALELFHEMLRERKFCPDRTTLVIALSAIAQLGNIDEGIAVHQYLEKNGFI 716
GY QNGY+ EALE+FHEM R+ PD TTLV+ALSAI+QLG++++ ++H Y +NG
Sbjct: 327 GYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGIS 386
Query: 717 VEGKLGVALIDMYAKSGSIEIAMHVFENVEERTVDHWNXXXXXXXXXXXXDVAFGLFIEM 896
V GK+ VALIDMY+K GSIE A+ +F+ V+++ +DHWN +AFG+ +EM
Sbjct: 387 VTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEM 446
Query: 897 ESLCVQPDDITFIGVLNACGHSGMVKEGMICFEIMSRIHKLEPKLHHYGCMVDILGRAGY 1076
L V+PD ITFIGVLNAC H+G+VKEG+ICFE+M ++HKLEPKL HYGCMVDILG+AG
Sbjct: 447 HRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGL 506
Query: 1077 IEEAARFIQDMPIEPNDVVWRTLLSACKSYENLYIGEQVANYLIQRDPHNSGSYVLLSNM 1256
+E A +FI++MPIEPND++WRTLLSAC+++EN IGE +A +L+ D NS SYVLLSN+
Sbjct: 507 VEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNI 566
Query: 1257 YASFSMWDCVRNVRTRMKERELEKVPGCSWIELEGAVHEFFVGDRSHPQVQEIYSSLDKW 1436
YA +W VR MK++ L KVPGCSWIELEG VHEF V D+SHP V EIYS LD +
Sbjct: 567 YARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVLDGF 626
Query: 1437 HAINSEISCCK 1469
A N ++ CK
Sbjct: 627 GASNLQVIDCK 637
>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 591 bits (1523), Expect = e-166
Identities = 286/469 (60%), Positives = 351/469 (74%), Gaps = 3/469 (0%)
Frame = +3
Query: 6 IHGVLRKFGFGCELVLHNCLICMYCKCGLVEFGRQVFDKMGVRDSVSFNSMIDGYVKNGK 185
IHG+L G ++ L NCL+C+Y +CG + RQ+FD+M RDSVSFNSMIDGYVK+G
Sbjct: 200 IHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGM 259
Query: 186 VELGREVFDSMPVELRNLVSWNCMICGYVHKFES---AWELFREMPDRDLISWNLMLDCC 356
V+ RE+FD MP+E +NL+SWN MI GY E AWELF EMP RDLISWN M+D C
Sbjct: 260 VKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGC 319
Query: 357 AKCGKMEVAFDLFSRMPKRDVISWANMIDGYGRLGCVDIARGLFDDMGERDVVSYNVMVA 536
KCGKME A LF+ MPKRDV+SWANM+DGY +LG +DIARGLFD+M ERDV+S N M+A
Sbjct: 320 VKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMA 379
Query: 537 GYVQNGYFKEALELFHEMLRERKFCPDRTTLVIALSAIAQLGNIDEGIAVHQYLEKNGFI 716
GYVQNG EAL FH+ML ++ P TL+I LSAIAQLG+ DEG+A+H Y+E NGF
Sbjct: 380 GYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 439
Query: 717 VEGKLGVALIDMYAKSGSIEIAMHVFENVEERTVDHWNXXXXXXXXXXXXDVAFGLFIEM 896
+ KLG ALIDMYAK GSI+ A+ +DHWN +VAF LF+EM
Sbjct: 440 LSEKLGXALIDMYAKCGSIDNAL----------IDHWNAIJXGLAIHGLGEVAFELFMEM 489
Query: 897 ESLCVQPDDITFIGVLNACGHSGMVKEGMICFEIMSRIHKLEPKLHHYGCMVDILGRAGY 1076
E L V+P+DITFIGVLNAC H+G+VKEG++ F +M +HK+EPKL HYGCMVDILGRAG+
Sbjct: 490 EKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGH 549
Query: 1077 IEEAARFIQDMPIEPNDVVWRTLLSACKSYENLYIGEQVANYLIQRDPHNSGSYVLLSNM 1256
+EE +F++ MPIEPNDVVWRTLLSAC+++EN IGE VA +LI D +N SYVLLSN+
Sbjct: 550 VEEXKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNI 609
Query: 1257 YASFSMWDCVRNVRTRMKERELEKVPGCSWIELEGAVHEFFVGDRSHPQ 1403
YA F MW+ V +R MK+R+L+K+PGCS IELEG VHEFFV D+SHPQ
Sbjct: 610 YAXFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 658
>ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 569 bits (1467), Expect = e-160
Identities = 279/493 (56%), Positives = 364/493 (73%), Gaps = 8/493 (1%)
Frame = +3
Query: 6 IHGVLRKFGFGCELVLHNCLICMYCKCGLVEFGRQVFDKMGVRDSVSFNSMIDGYVKNGK 185
IHG+L K G ++ L NCL+C+Y +CG + RQ+FD+M +DSVSFNSMIDGYVK+G
Sbjct: 138 IHGLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDSVSFNSMIDGYVKHGM 197
Query: 186 VELGREVFDSMPVELRNLVSWNCMICGYVHKFES---AWELFREMPDRDLISWNLMLDCC 356
V+ E+FD MP+E + L+SWN MI Y E AWELF EMP +DLISWN M++ C
Sbjct: 198 VKSAWELFDVMPMEQKILISWNSMISEYARSEERLKVAWELFEEMPKKDLISWNSMINGC 257
Query: 357 AKCGKMEVAFDLFSRMPKRDVISWANMIDGYGRLGCVDIARGLFDDMGERDVVSYNVMVA 536
KCGKME LF+RMPKR V+S ANM++G+ +LG +DIARGLF +M E DV+S N M+A
Sbjct: 258 VKCGKMENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMA 317
Query: 537 GYVQNGYFKEALELFHEMLRERKFCPDRTTLVIALSAIAQLGNIDEGIAVHQYLEKNGFI 716
YVQNGY E+L+ FH+ML + F D TL+I LSAIAQLG+ DEG+A+H Y+E NGF
Sbjct: 318 RYVQNGYLMESLKNFHDMLSKELFL-DNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 376
Query: 717 VEGKLGVALIDMYAKSGSIEIAMHVFENVEERTVDHWNXXXXXXXXXXXXDVAFGLFIEM 896
+ KLGVALID YAK GSI+ A+ VFE+++ +++DHWN +VAF LF+EM
Sbjct: 377 LSEKLGVALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFMEM 436
Query: 897 ESLCVQPDDITFIGVLNACGHSGMVKEGMICFEIMSRIHKLEPKLHHYGCMVDILGRAGY 1076
E L V+P+DITFIGVLNAC H+G+VKEG++CFE+M R+ K+EPKL HY CMVDILG+AG+
Sbjct: 437 EKLFVKPNDITFIGVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAGH 496
Query: 1077 IEEAARFIQDMPIEPNDVVWRTLLSACKSYENLYIGEQVANYLIQRDPHNSGSYVLLSNM 1256
+EE +F++ M IEPNDVVWRTLLSAC+++EN IGE VA +LI D +N SYVLLSN+
Sbjct: 497 VEETKKFVEKMSIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNLSSYVLLSNI 556
Query: 1257 YASFSMWDCVRNVRTRMKERELEKVPGCSWIELEGAVHEFFVGDRSHPQV-----QEIYS 1421
YA F +W+ V +R MK+R+L+K+PGCS IELEG VH+FFV D+SHPQ +E+
Sbjct: 557 YAGFGIWNDVHRIRMMMKQRDLKKIPGCSQIELEGNVHKFFVRDKSHPQAKTGREKELEV 616
Query: 1422 SLDKWHAINSEIS 1460
+L + N++IS
Sbjct: 617 ALQRLRGENTDIS 629