BLASTX nr result

ID: Angelica22_contig00011792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011792
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265...   201   1e-49
ref|XP_002519745.1| COR414-TM1, putative [Ricinus communis] gi|2...   190   4e-46
ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane...   187   2e-45
ref|NP_564328.1| cold regulated 314 inner membrane 1 [Arabidopsi...   179   8e-43

>ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265908 [Vitis vinifera]
           gi|297740634|emb|CBI30816.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  201 bits (512), Expect = 1e-49
 Identities = 101/167 (60%), Positives = 128/167 (76%)
 Frame = +1

Query: 28  HYHIMLQSKRGFGSSVCDYAPLSSLNLQWINTISSAILMLANGTSIPKSFLVPIFALQAP 207
           H  +M +++RGFG+ VC  APL+  NLQW+ T+SSA+LML+ GT+  KSFLVP+FALQAP
Sbjct: 45  HGVVMKKNRRGFGA-VCYSAPLTPPNLQWVCTVSSAVLMLSRGTAAQKSFLVPLFALQAP 103

Query: 208 ASIVSWIRGEYGVWTXXXXXXXXXXXHIPDELELPFNALLIVLVAPYQILNLRGKLEAVI 387
            SI+SWI+GEYG WT            IP ELELPF ALL+V+VAPYQ++NLRG     I
Sbjct: 104 TSIISWIKGEYGAWTAFLALLVRLFFFIPGELELPFVALLLVIVAPYQVMNLRGTQMGAI 163

Query: 388 LSLTIAGYLSFRHFSQAGSLRKAFDQGSIVATICIICVLAVPILLLI 528
           +SL IAGYL+F+HFS+AGSL++AF+QGSIVAT+ IIC+ AV  LL I
Sbjct: 164 VSLLIAGYLAFQHFSRAGSLQRAFNQGSIVATLAIICITAVSCLLFI 210


>ref|XP_002519745.1| COR414-TM1, putative [Ricinus communis] gi|223541162|gb|EEF42718.1|
           COR414-TM1, putative [Ricinus communis]
          Length = 223

 Score =  190 bits (482), Expect = 4e-46
 Identities = 96/162 (59%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
 Frame = +1

Query: 43  LQSK-RGFGSSVCDYAPLSSLNLQWINTISSAILMLANGTSIPKSFLVPIFALQAPASIV 219
           LQ K R FG+ +C   PLS+ NLQWI+TISSAILM+A GT+I KSF+VP+ ALQAP++++
Sbjct: 62  LQKKVRRFGA-LCYAGPLSTSNLQWISTISSAILMVAKGTAIQKSFVVPLLALQAPSTVI 120

Query: 220 SWIRGEYGVWTXXXXXXXXXXXHIPDELELPFNALLIVLVAPYQILNLRGKLEAVILSLT 399
           SW++GEYG+WT            IP ELELPF ALL+VLVAPYQ+ NLRG  E   + L 
Sbjct: 121 SWMKGEYGIWTAFLALLVRLFFFIPGELELPFLALLLVLVAPYQVTNLRGTQEGATIGLA 180

Query: 400 IAGYLSFRHFSQAGSLRKAFDQGSIVATICIICVLAVPILLL 525
           IAGYL+F+HF++AG+L+KAF+QGSIVAT+ IICV  +  L L
Sbjct: 181 IAGYLAFQHFTRAGNLQKAFEQGSIVATLAIICVTVISCLFL 222


>ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|222875388|gb|EEF12519.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  188 bits (477), Expect = 1e-45
 Identities = 88/161 (54%), Positives = 123/161 (76%)
 Frame = +1

Query: 46  QSKRGFGSSVCDYAPLSSLNLQWINTISSAILMLANGTSIPKSFLVPIFALQAPASIVSW 225
           +S RGFG+ VC    L++ +L WI+ +SSA+L+LA GT++ KSFLVP+FALQAP +++SW
Sbjct: 70  ESGRGFGA-VCHAGSLTTPSLPWISALSSAVLVLAKGTAVQKSFLVPLFALQAPPAVISW 128

Query: 226 IRGEYGVWTXXXXXXXXXXXHIPDELELPFNALLIVLVAPYQILNLRGKLEAVILSLTIA 405
           I+GEYG+WT            IP ELELPF ALL+V+VAPYQ++N+RGK E  I+ L IA
Sbjct: 129 IKGEYGIWTAFLALLFRLFFFIPGELELPFMALLLVIVAPYQVMNIRGKQEGAIVGLVIA 188

Query: 406 GYLSFRHFSQAGSLRKAFDQGSIVATICIICVLAVPILLLI 528
            YL+F+HFS+ G++++AF+QGS+VATI ++CV+    LLLI
Sbjct: 189 AYLAFQHFSRIGNMQRAFEQGSVVATIAVVCVVVTSCLLLI 229


>ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
           gi|449500602|ref|XP_004161143.1| PREDICTED:
           cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 224

 Score =  187 bits (475), Expect = 2e-45
 Identities = 88/154 (57%), Positives = 117/154 (75%)
 Frame = +1

Query: 67  SSVCDYAPLSSLNLQWINTISSAILMLANGTSIPKSFLVPIFALQAPASIVSWIRGEYGV 246
           S+VC   P+++  LQWI+TISS +LMLA GT I KSF+VP+FALQAPAS++SWI+GEYG+
Sbjct: 71  SAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGI 130

Query: 247 WTXXXXXXXXXXXHIPDELELPFNALLIVLVAPYQILNLRGKLEAVILSLTIAGYLSFRH 426
           W+            IP ELE+PF +LL+V+VAPYQ+ NLRG  E  I+SL IA YL+F+H
Sbjct: 131 WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQH 190

Query: 427 FSQAGSLRKAFDQGSIVATICIICVLAVPILLLI 528
           FS+AGS ++AFDQ SIVAT+ ++C+ AV  L +I
Sbjct: 191 FSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224


>ref|NP_564328.1| cold regulated 314 inner membrane 1 [Arabidopsis thaliana]
           gi|75164996|sp|Q94AL8.1|CRIM1_ARATH RecName:
           Full=Cold-regulated 413 inner membrane protein 1,
           chloroplastic; Short=AtCOR413-IM1; AltName:
           Full=Cold-regulated 413 thylakoid membrane 1;
           Short=AtCOR413-TM1; Flags: Precursor
           gi|15028239|gb|AAK76616.1| unknown protein [Arabidopsis
           thaliana] gi|21592634|gb|AAM64583.1| unknown
           [Arabidopsis thaliana] gi|22136822|gb|AAM91755.1|
           unknown protein [Arabidopsis thaliana]
           gi|26452616|dbj|BAC43391.1| unknown protein [Arabidopsis
           thaliana] gi|332192960|gb|AEE31081.1| cold regulated 314
           inner membrane 1 [Arabidopsis thaliana]
          Length = 225

 Score =  179 bits (453), Expect = 8e-43
 Identities = 89/163 (54%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = +1

Query: 43  LQSKRGFGSSV-CDYAPLSSLNLQWINTISSAILMLANGTSIPKSFLVPIFALQAPASIV 219
           ++ +R  GSSV C  AP+S+ +LQWI+TIS   LMLA GT I KS +VP+FAL AP+SIV
Sbjct: 63  VEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFALHAPSSIV 122

Query: 220 SWIRGEYGVWTXXXXXXXXXXXHIPDELELPFNALLIVLVAPYQILNLRGKLEAVILSLT 399
           +WI+GEYGVW              P ELELPF ALL+V+VAPYQ++N+RGK E  I+++ 
Sbjct: 123 AWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQEGAIIAIA 182

Query: 400 IAGYLSFRHFSQAGSLRKAFDQGSIVATICIICVLAVPILLLI 528
           I+G+L+F+HFS+AGSL KA+++GS++AT+ II V  V +LLL+
Sbjct: 183 ISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225


Top