BLASTX nr result

ID: Angelica22_contig00011499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011499
         (1615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotei...   619   e-175
ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycin...   619   e-175
ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotei...   615   e-174
ref|XP_002326058.1| predicted protein [Populus trichocarpa] gi|2...   614   e-173
ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communi...   609   e-172

>ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            isoform 1 [Glycine max] gi|356571750|ref|XP_003554036.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa
            protein-like isoform 2 [Glycine max]
            gi|356571752|ref|XP_003554037.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 40 kDa protein-like isoform 3
            [Glycine max]
          Length = 345

 Score =  619 bits (1596), Expect = e-175
 Identities = 290/345 (84%), Positives = 316/345 (91%)
 Frame = -3

Query: 1358 MQALHRDGESSLSLMGPRPMELSTAPHAGSHASRSNGKQRTSSLESPIMLLTGHQSAVYT 1179
            MQ    +GES+LS++GPRPME ST P+    A   NGKQRTSSLESPIMLL+GHQSA+YT
Sbjct: 1    MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 1178 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 999
            MKFNP G+V+ASGSHDREIFLWNVHG+CKNFMVLKGHKNAVLDL WTTDG+QI+SAS DK
Sbjct: 61   MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 998  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 819
            T+RAWDVETGKQIKKM EH   VNSCCPSRRGPPL VSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 818  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 639
            DKYQITAVGFSDASDKI++GGIDN+VK+WDLR+ EVTMTL+GHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLL 240

Query: 638  TNGMDSTLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 459
            TNGMD  L IWDMRPYAPQNRCVKVL+GHQHNFE+NLLKCGWSPDGSKVTAGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 458  WDTTTRRILYKLPGHTGSVNECGFHPNEPIIGSCSSDKQIFLGEI 324
            WDTT+RRILYKLPGH GSVNEC FHPNEPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycine max]
            gi|255645285|gb|ACU23139.1| unknown [Glycine max]
          Length = 345

 Score =  619 bits (1595), Expect = e-175
 Identities = 291/345 (84%), Positives = 316/345 (91%)
 Frame = -3

Query: 1358 MQALHRDGESSLSLMGPRPMELSTAPHAGSHASRSNGKQRTSSLESPIMLLTGHQSAVYT 1179
            MQ    +GES+LS++GPRPME ST P+    A   NGKQRTSSLESPIMLL+GHQSA+YT
Sbjct: 1    MQVFSIEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 1178 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 999
            MKFNP G+VIASGSHDREIFLWNVHG+CKNFMVLKGHKNAVLDL WTTDG+QI+SAS DK
Sbjct: 61   MKFNPAGSVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 998  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 819
            T+RAWDVETGKQIKKM EH   VNSCCPSRRGPPL VSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 818  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 639
            DKYQITAVGFSDASDKI++GGIDN+VK+WDLR+ EVTMTL+GHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYLL 240

Query: 638  TNGMDSTLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 459
            TNGMD  L IWDMRPYAPQNRCVKVL+GHQHNFE+NLLKCGWSPDGSKVTAGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 458  WDTTTRRILYKLPGHTGSVNECGFHPNEPIIGSCSSDKQIFLGEI 324
            WDTT+RRILYKLPGH GSVNEC FHPNEPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Vitis vinifera]
          Length = 344

 Score =  615 bits (1587), Expect = e-174
 Identities = 292/338 (86%), Positives = 315/338 (93%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1334 ESSLSLMGPRP-MELSTAPHAGSHASRSNGKQRTSSLESPIMLLTGHQSAVYTMKFNPTG 1158
            E++LS++GPRP MELS  P  G  A  +NGKQRTSSLESPIMLL GHQSA+YTMKFNPTG
Sbjct: 7    ENALSVVGPRPGMELSAVPCTGPRAPGANGKQRTSSLESPIMLLAGHQSAIYTMKFNPTG 66

Query: 1157 NVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADKTLRAWDV 978
             VIASGSH+REIFLW VHG+CKNFMVLKGHKNA+LDLQWTTDG+QIISAS DKTLRAWDV
Sbjct: 67   TVIASGSHEREIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQIISASPDKTLRAWDV 126

Query: 977  ETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFPDKYQITA 798
            ETGKQIKKMAEHS  VNSCCPSRRGPPL VSGSDDGTAKLWD+RQRGAIQTFPDKYQITA
Sbjct: 127  ETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA 186

Query: 797  VGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLLTNGMDST 618
            V FSDASDKI++GGIDN+VKVWDLRRNEVTMTL+GHQD ITGMQLSPDGSYLLTNGMD  
Sbjct: 187  VSFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCK 246

Query: 617  LRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYIWDTTTRR 438
            L IWDMRPYAPQNRCVK+L+GHQHNFE+NLLKC WSPDGSKVTAGS+DRMVYIWDTT+RR
Sbjct: 247  LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRR 306

Query: 437  ILYKLPGHTGSVNECGFHPNEPIIGSCSSDKQIFLGEI 324
            ILYKLPGHTGSVNEC FHP+EPI+GSCSSDKQI+LGEI
Sbjct: 307  ILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344


>ref|XP_002326058.1| predicted protein [Populus trichocarpa] gi|222862933|gb|EEF00440.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  614 bits (1584), Expect = e-173
 Identities = 289/345 (83%), Positives = 313/345 (90%)
 Frame = -3

Query: 1358 MQALHRDGESSLSLMGPRPMELSTAPHAGSHASRSNGKQRTSSLESPIMLLTGHQSAVYT 1179
            MQ + R+ ES+LS+ GPRPME ST P+ GS     NGKQR SSLESPIMLLTGHQSA+YT
Sbjct: 1    MQVVPRESESALSVSGPRPMEWSTVPYTGSQGPGHNGKQRRSSLESPIMLLTGHQSAIYT 60

Query: 1178 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 999
            MKFNP GNVIASGSHD+EIFLW +HGECKNFMV++GHKNAVLDL WT DGSQIISAS DK
Sbjct: 61   MKFNPAGNVIASGSHDKEIFLWYMHGECKNFMVMRGHKNAVLDLHWTADGSQIISASPDK 120

Query: 998  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 819
            T+RAWDVETGKQIKKMAEHS  VNSCCPSRRGPPL VSGSDDGT+KLWDLRQ+GAIQTFP
Sbjct: 121  TVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFP 180

Query: 818  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 639
            DKYQITAV FSDASDKI++GGIDN+VKVWD+R+ EVTMTLEGHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL 240

Query: 638  TNGMDSTLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 459
            TNGMD+ L IWDMRPYAPQNRCVK+ +GHQHNFE+NLLKC WSPDGSKVTAGSADRMVYI
Sbjct: 241  TNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYI 300

Query: 458  WDTTTRRILYKLPGHTGSVNECGFHPNEPIIGSCSSDKQIFLGEI 324
            WDTT+RRILYKLPGH GSVNEC FHP EPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHAGSVNECVFHPTEPIIGSCSSDKQIYLGEI 345


>ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535828|gb|EEF37489.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 345

 Score =  609 bits (1571), Expect = e-172
 Identities = 288/345 (83%), Positives = 313/345 (90%)
 Frame = -3

Query: 1358 MQALHRDGESSLSLMGPRPMELSTAPHAGSHASRSNGKQRTSSLESPIMLLTGHQSAVYT 1179
            MQ   R+G+++LS+ G RPME ST P+ G      +GKQRTSSLES IMLLTGHQSAVYT
Sbjct: 1    MQVAPREGDNALSVPGSRPMEWSTVPYTGLQGPGPSGKQRTSSLESTIMLLTGHQSAVYT 60

Query: 1178 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 999
            MKFNP GN+IASGSHD++IFLW VHGECKNFMVLKGHKNAVLDL WTTDGSQIISAS DK
Sbjct: 61   MKFNPAGNLIASGSHDKDIFLWYVHGECKNFMVLKGHKNAVLDLHWTTDGSQIISASPDK 120

Query: 998  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 819
            T+RAWD+ETGKQIKKMAEHS  VNSCCP+RRGPPL VSGSDDGTAKLWD+RQRGAIQTFP
Sbjct: 121  TVRAWDIETGKQIKKMAEHSSFVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP 180

Query: 818  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 639
            DKYQITAV FSDASDKI++GGIDN VKVWDLR+ EVTM LEGHQD ITGMQLSPDGSYLL
Sbjct: 181  DKYQITAVSFSDASDKIFTGGIDNEVKVWDLRKGEVTMKLEGHQDMITGMQLSPDGSYLL 240

Query: 638  TNGMDSTLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 459
            TNGMD  L IWDMRPYAPQNRCVK+L+GHQHNFE+NLLKC WSPDG+KVTAGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCNWSPDGTKVTAGSSDRMVYI 300

Query: 458  WDTTTRRILYKLPGHTGSVNECGFHPNEPIIGSCSSDKQIFLGEI 324
            WDTT+RRILYKLPGHTGSVNEC FHP+EPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHTGSVNECVFHPHEPIIGSCSSDKQIYLGEI 345


Top