BLASTX nr result

ID: Angelica22_contig00011488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011488
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|1...   257   3e-66
ref|XP_002274839.1| PREDICTED: ATP-dependent Clp protease adapte...   252   9e-65
ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|2...   249   4e-64
ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapte...   249   6e-64
ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS...   243   4e-62

>ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|118481362|gb|ABK92624.1|
           unknown [Populus trichocarpa]
           gi|222851266|gb|EEE88813.1| predicted protein [Populus
           trichocarpa]
          Length = 158

 Score =  257 bits (656), Expect = 3e-66
 Identities = 125/158 (79%), Positives = 141/158 (89%), Gaps = 2/158 (1%)
 Frame = +2

Query: 104 METAICGRVALSPNHIFHPKSGDKHLYKQ--FANRSNFMAMSATGVGKGGGVMDKPVIEK 277
           METAICGR+ALSPNH+F+PK GDK+   +   ANR   MA+S T  GKGGG+++KPVIE+
Sbjct: 1   METAICGRIALSPNHVFNPKPGDKNSVCRGPCANRGILMAISTTCSGKGGGLLEKPVIER 60

Query: 278 TTPGRESEFDVRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAH 457
           TTPGRESEFD+RKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMT+D AVN+MQEAH
Sbjct: 61  TTPGRESEFDLRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 458 HNGLAVVIICDQVDAEDHCMQLRGNGLQSSIEPASGGC 571
           +NGL+VVIIC Q DAE+HCMQLRGNGL SSIEPASGGC
Sbjct: 121 YNGLSVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 158


>ref|XP_002274839.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
           vinifera] gi|297734178|emb|CBI15425.3| unnamed protein
           product [Vitis vinifera]
          Length = 157

 Score =  252 bits (643), Expect = 9e-65
 Identities = 121/157 (77%), Positives = 137/157 (87%), Gaps = 1/157 (0%)
 Frame = +2

Query: 104 METAICGRVALSPNHIFHPKSGDKH-LYKQFANRSNFMAMSATGVGKGGGVMDKPVIEKT 280
           METAICGRV LSPNH F  KSGDKH L KQ+ +R+  M +SA   GKG GV+++P IE+ 
Sbjct: 1   METAICGRVPLSPNHFFTSKSGDKHSLSKQWTHRTMLMTVSAAAPGKGSGVLERPTIERI 60

Query: 281 TPGRESEFDVRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAHH 460
            PGRESEFD+RKS+KM+PPYRV+LHNDNYNKREYVVQVLMKVIPGMT+D AVN+MQEAHH
Sbjct: 61  MPGRESEFDLRKSRKMSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHH 120

Query: 461 NGLAVVIICDQVDAEDHCMQLRGNGLQSSIEPASGGC 571
           NG++VVIIC QVDAEDHCMQLRGNGL SSIEPASGGC
Sbjct: 121 NGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASGGC 157


>ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|222864995|gb|EEF02126.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  249 bits (637), Expect = 4e-64
 Identities = 123/162 (75%), Positives = 142/162 (87%), Gaps = 6/162 (3%)
 Frame = +2

Query: 104 METAICGRVALSPNHIFHPKSGDKHLYKQ--FANRSNFMAMSAT----GVGKGGGVMDKP 265
           METAICGR+ALSPNH+F+PK GDK+   +   A+R   M++SAT    G G GGG+++KP
Sbjct: 1   METAICGRIALSPNHVFNPKPGDKNSVCRGPCASRGILMSISATVSGKGGGGGGGILEKP 60

Query: 266 VIEKTTPGRESEFDVRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVM 445
           VIE+TTPGRESEFD+RKSKKMAPPYRV+LHNDNYNKREYVVQVLMKVIPGMT+D AVN+M
Sbjct: 61  VIERTTPGRESEFDLRKSKKMAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIM 120

Query: 446 QEAHHNGLAVVIICDQVDAEDHCMQLRGNGLQSSIEPASGGC 571
           QEAH+NGL+VVIIC Q DAE+HCMQLRGNGL SSIEPASGGC
Sbjct: 121 QEAHYNGLSVVIICTQADAEEHCMQLRGNGLLSSIEPASGGC 162


>ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
           vinifera] gi|147853628|emb|CAN80233.1| hypothetical
           protein VITISV_037190 [Vitis vinifera]
          Length = 157

 Score =  249 bits (636), Expect = 6e-64
 Identities = 123/158 (77%), Positives = 140/158 (88%), Gaps = 2/158 (1%)
 Frame = +2

Query: 104 METAICGRVALSPNHIFHPKSGDKH--LYKQFANRSNFMAMSATGVGKGGGVMDKPVIEK 277
           ME AICGR+ALSPNH+F+ KSGDKH  L     NRS  MA+SA+G GKGG ++++PVIEK
Sbjct: 1   MENAICGRLALSPNHVFNSKSGDKHSLLKGPCTNRSFLMAISASGPGKGG-LLERPVIEK 59

Query: 278 TTPGRESEFDVRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAH 457
            TPGRESEFD+RKS+K+APPYRV+LHNDNYNKREYVVQVLMKVIPGMT+D AVN+MQEAH
Sbjct: 60  VTPGRESEFDLRKSRKIAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 119

Query: 458 HNGLAVVIICDQVDAEDHCMQLRGNGLQSSIEPASGGC 571
           +NGL+VVIIC Q DAEDHCMQLRGNGL SSIEPASGGC
Sbjct: 120 YNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 157


>ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis
           thaliana] gi|5734712|gb|AAD49977.1|AC008075_10 ESTs
           gb|T41781 and gb|AA586096 come from this gene
           [Arabidopsis thaliana]
           gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein
           [Arabidopsis thaliana] gi|15010628|gb|AAK73973.1|
           At1g68660/F24J5_4 [Arabidopsis thaliana]
           gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4
           [Arabidopsis thaliana] gi|21553930|gb|AAM63011.1|
           unknown [Arabidopsis thaliana]
           gi|332196703|gb|AEE34824.1| ATP-dependent Clp protease
           adaptor protein ClpS [Arabidopsis thaliana]
          Length = 159

 Score =  243 bits (620), Expect = 4e-62
 Identities = 119/159 (74%), Positives = 137/159 (86%), Gaps = 3/159 (1%)
 Frame = +2

Query: 104 METAICGRVALSPNHIFHPKSGDKHLYKQ--FANRSNFMAMSATG-VGKGGGVMDKPVIE 274
           METAICGR+AL+P+ +F+ KSGDKHL  +    NRS  M +S +  +GKGGGV+DKP+IE
Sbjct: 1   METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60

Query: 275 KTTPGRESEFDVRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEA 454
           KTTPGRESEFD+RKSKK+APPYRV+LHNDN+NKREYVVQVLMKVIPGMTVD AVN+MQEA
Sbjct: 61  KTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQEA 120

Query: 455 HHNGLAVVIICDQVDAEDHCMQLRGNGLQSSIEPASGGC 571
           H NGLAVVI+C Q DAE HCMQLRGNGL SS+EP  GGC
Sbjct: 121 HINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159


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