BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011464
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L...   132   8e-29
ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...   131   1e-28
ref|XP_003565733.1| PREDICTED: ubiquitin-60S ribosomal protein L...   130   2e-28
ref|XP_002166450.2| PREDICTED: ubiquitin-60S ribosomal protein L...   130   2e-28
ref|NP_565836.1| 60S ribosomal protein L40-2 [Arabidopsis thalia...   130   3e-28

>ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score =  132 bits (331), Expect = 8e-29
 Identities = 70/141 (49%), Positives = 96/141 (68%), Gaps = 2/141 (1%)
 Frame = -3

Query: 605 SKFQIFVKSLSGKTISLGVDSTDSVEYVKTLVVEETGGVADLEETRLVFAGKELEDECLV 426
           +K QIFVK+L+GKTI+L V+S+D+++ VK  + ++ G   D  + RL+FAGK+LED   +
Sbjct: 75  AKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPD--QQRLIFAGKQLEDGRTL 132

Query: 425 GDYDIQHDSMVDAXXXXXXXXXXXXK--IDPNLLVLAQKHNQNMMVCRKCYARLDVRAKN 252
            DY+IQ +S +                 ++PNL +LAQK+N+N MVCRKCYARL +RA +
Sbjct: 133 ADYNIQKESTLHLVLRLRGGSRGQYPKNLEPNLRILAQKYNENKMVCRKCYARLPLRATH 192

Query: 251 CRKKKCGHSNQLRPKSILDSK 189
           CRKKKCGHSNQLR K    SK
Sbjct: 193 CRKKKCGHSNQLREKKRFMSK 213



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/66 (46%), Positives = 48/66 (72%)
 Frame = -3

Query: 596 QIFVKSLSGKTISLGVDSTDSVEYVKTLVVEETGGVADLEETRLVFAGKELEDECLVGDY 417
           QIFVK+L+GKTI+L V+S D+++ VK  + ++ G   D  + RL+FAGK+L+D   + DY
Sbjct: 2   QIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPD--QQRLIFAGKQLDDGRTLADY 59

Query: 416 DIQHDS 399
           +IQ +S
Sbjct: 60  NIQKES 65


>ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein L40
           [Vitis vinifera]
          Length = 228

 Score =  131 bits (330), Expect = 1e-28
 Identities = 68/132 (51%), Positives = 93/132 (70%)
 Frame = -3

Query: 602 KFQIFVKSLSGKTISLGVDSTDSVEYVKTLVVEETGGVADLEETRLVFAGKELEDECLVG 423
           K QIFVK+L+GKTI+L V+S+D+++ VK  + ++ G   D  + RL+FAGK+LED   + 
Sbjct: 100 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLA 157

Query: 422 DYDIQHDSMVDAXXXXXXXXXXXXKIDPNLLVLAQKHNQNMMVCRKCYARLDVRAKNCRK 243
           DY+IQ +S +               I+P+L+ LA+K+NQ+ M+CRKCYARL  RA NCRK
Sbjct: 158 DYNIQKESTLHLVLRLRGGI-----IEPSLMALARKYNQDKMICRKCYARLHPRAVNCRK 212

Query: 242 KKCGHSNQLRPK 207
           KKCGHSNQLRPK
Sbjct: 213 KKCGHSNQLRPK 224


>ref|XP_003565733.1| PREDICTED: ubiquitin-60S ribosomal protein L40-2-like [Brachypodium
           distachyon]
          Length = 139

 Score =  130 bits (328), Expect = 2e-28
 Identities = 69/137 (50%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
 Frame = -3

Query: 596 QIFVKSLSGKTISLGVDSTDSVEYVKTLVVEETGGVADLEETRLVFAGKELEDECLVGDY 417
           QIFVK+L+GKTI+L V+S D+++ VK  + ++ G   D  + RL+F+GK+LED   +  Y
Sbjct: 2   QIFVKTLTGKTITLEVESRDTIDNVKAKIQDKEGITPD--QQRLIFSGKQLEDGRTMAKY 59

Query: 416 DIQHDSMVD-AXXXXXXXXXXXXKIDPNLLVLAQKHNQNMMVCRKCYARLDVRAKNCRKK 240
           +IQ +S +               +IDPNL +LA KHN+N MVCRKC+ARL VR+ NCRKK
Sbjct: 60  NIQKESTLHLVLRLFGGGRGWYPRIDPNLRILALKHNENKMVCRKCFARLPVRSINCRKK 119

Query: 239 KCGHSNQLRPKSILDSK 189
           KCGHSNQ+RPK    SK
Sbjct: 120 KCGHSNQVRPKKKFASK 136


>ref|XP_002166450.2| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Hydra
           magnipapillata]
          Length = 128

 Score =  130 bits (327), Expect = 2e-28
 Identities = 68/133 (51%), Positives = 92/133 (69%)
 Frame = -3

Query: 596 QIFVKSLSGKTISLGVDSTDSVEYVKTLVVEETGGVADLEETRLVFAGKELEDECLVGDY 417
           QIFVK+L+GKTI+L V++ D++E VK  + ++ G   D  + RL+FAGK+LED   + DY
Sbjct: 2   QIFVKTLTGKTITLEVEAADTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDY 59

Query: 416 DIQHDSMVDAXXXXXXXXXXXXKIDPNLLVLAQKHNQNMMVCRKCYARLDVRAKNCRKKK 237
           +IQ +S +               I+P+L +LAQK+N + M+CRKCYARL +RAKNCRKKK
Sbjct: 60  NIQKESTLHLVLRLRGGV-----IEPSLRILAQKYNCDKMICRKCYARLHIRAKNCRKKK 114

Query: 236 CGHSNQLRPKSIL 198
           CGHSN LRPK  L
Sbjct: 115 CGHSNNLRPKKKL 127


>ref|NP_565836.1| 60S ribosomal protein L40-2 [Arabidopsis thaliana]
           gi|18409639|ref|NP_566969.1| 60S ribosomal protein L40-2
           [Arabidopsis thaliana]
           gi|302425250|sp|Q42202.2|RL40B_ARATH RecName:
           Full=Ubiquitin-60S ribosomal protein L40-2; AltName:
           Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 16;
           AltName: Full=Protein EMBRYO DEFECTIVE 2167; AltName:
           Full=Protein HAPLESS 4; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=60S ribosomal
           protein L40-2; AltName: Full=CEP52; Flags: Precursor
           gi|302595860|sp|B9DHA6.1|RL40A_ARATH RecName:
           Full=Ubiquitin-60S ribosomal protein L40-1; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40-1; AltName: Full=CEP52; Flags:
           Precursor gi|13430798|gb|AAK26021.1|AF360311_1 putative
           ubiquitin extension protein UBQ2 [Arabidopsis thaliana]
           gi|166930|gb|AAA32904.1| ubiquitin extension protein
           (UBQ1) [Arabidopsis thaliana] gi|166932|gb|AAA32905.1|
           ubiquitin extension protein (UBQ2) [Arabidopsis
           thaliana] gi|4886268|emb|CAB43405.1| ubiquitin /
           ribosomal protein CEP52 [Arabidopsis thaliana]
           gi|14334950|gb|AAK59652.1| putative ubiquitin extension
           protein UBQ1 [Arabidopsis thaliana]
           gi|15810643|gb|AAL07246.1| putative ubiquitin extension
           protein UBQ2 [Arabidopsis thaliana]
           gi|16323384|gb|AAL15186.1| putative ubiquitin extension
           protein UBQ1 [Arabidopsis thaliana]
           gi|20198116|gb|AAM15407.1| ubiquitin extension protein
           (UBQ2) [Arabidopsis thaliana] gi|21553955|gb|AAM63036.1|
           ubiquitin extension protein UBQ1 [Arabidopsis thaliana]
           gi|222424333|dbj|BAH20123.1| AT2G36170 [Arabidopsis
           thaliana] gi|330254118|gb|AEC09212.1| 60S ribosomal
           protein L40-2 [Arabidopsis thaliana]
           gi|332645445|gb|AEE78966.1| 60S ribosomal protein L40-2
           [Arabidopsis thaliana]
          Length = 128

 Score =  130 bits (326), Expect = 3e-28
 Identities = 67/130 (51%), Positives = 93/130 (71%)
 Frame = -3

Query: 596 QIFVKSLSGKTISLGVDSTDSVEYVKTLVVEETGGVADLEETRLVFAGKELEDECLVGDY 417
           QIFVK+L+GKTI+L V+S+D+++ VK  + ++ G   D  + RL+FAGK+LED   + DY
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLADY 59

Query: 416 DIQHDSMVDAXXXXXXXXXXXXKIDPNLLVLAQKHNQNMMVCRKCYARLDVRAKNCRKKK 237
           +IQ +S +               I+P+L++LA+K+NQ+ M+CRKCYARL  RA NCRKKK
Sbjct: 60  NIQKESTLHLVLRLRGGI-----IEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKK 114

Query: 236 CGHSNQLRPK 207
           CGHSNQLRPK
Sbjct: 115 CGHSNQLRPK 124