BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011395
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    71   6e-16
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    66   3e-14
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    66   7e-14
ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [S...    69   3e-13
gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]          65   4e-13

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197043|gb|AAM14892.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1412

 Score = 70.9 bits (172), Expect(2) = 6e-16
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = -1

Query: 224 TRSVTGKDVTRAIQHFFSATHLPHMINSTAVTRIPKINSPTSMKDFRPLACCNVNYKGIA 45
           T SV G++VT AI+ FF+   LP  +NST +  IPK      MKD+RP++CCNV YK I+
Sbjct: 750 TWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAIS 809

Query: 44  KLFASRPICV 15
           KL A+R  C+
Sbjct: 810 KLLANRLKCL 819



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 342 QANVVQQPFLDSEILHTFKSMRTLKSPGPDGYTSEFF 232
           + N++     ++E++  F S+   KSPGPDGYT EFF
Sbjct: 711 EQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFF 747


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1529

 Score = 66.2 bits (160), Expect(2) = 3e-14
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -1

Query: 227 STRSVTGKDVTRAIQHFFSATHLPHMINSTAVTRIPKINSPTSMKDFRPLACCNVNYKGI 48
           +T S+TG D   AIQ FF    LP  +N+T +  IPK +    MKD+RP++CCNV YK I
Sbjct: 780 ATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVI 839

Query: 47  AKLFASR 27
           +K+ A+R
Sbjct: 840 SKILANR 846



 Score = 37.0 bits (84), Expect(2) = 3e-14
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -3

Query: 336 NVVQQPFLDSEILHTFKSMRTLKSPGPDGYTSEFF 232
           N++ +     EI     +M   KSPGPDGYTSEFF
Sbjct: 744 NILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFF 778


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 65.9 bits (159), Expect(2) = 7e-14
 Identities = 31/67 (46%), Positives = 43/67 (64%)
 Frame = -1

Query: 227 STRSVTGKDVTRAIQHFFSATHLPHMINSTAVTRIPKINSPTSMKDFRPLACCNVNYKGI 48
           +T  + G + T A+Q FF+   LP  INST +  IPK      MKD+RP++CCNV YK I
Sbjct: 483 ATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVI 542

Query: 47  AKLFASR 27
           +K+ A+R
Sbjct: 543 SKIIANR 549



 Score = 35.8 bits (81), Expect(2) = 7e-14
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 387 TCRKLDRVLDV-VSE*QANVVQQPFLDSEILHTFKSMRTLKSPGPDGYTSEFF 232
           T  +L ++L V  S+     + +P    EI      M + KSPGPDGYTSEFF
Sbjct: 429 TITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFF 481


>ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [Sorghum bicolor]
           gi|241929198|gb|EES02343.1| hypothetical protein
           SORBIDRAFT_03g003583 [Sorghum bicolor]
          Length = 564

 Score = 69.3 bits (168), Expect(2) = 3e-13
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = -1

Query: 212 TGKDVTRAIQHFFSATHLPHMINSTAVTRIPKINSPTSMKDFRPLACCNVNYKGIAKLFA 33
           TGKDV   +  F+   +LP  IN T +T IPK+N+P + KD+RP++ CNV+YK IAK  A
Sbjct: 109 TGKDVLDLVTAFYQTGNLPSDINKTHITLIPKVNTPVTPKDYRPISLCNVSYKVIAKSLA 168

Query: 32  SRPIC 18
            R  C
Sbjct: 169 DRIKC 173



 Score = 30.4 bits (67), Expect(2) = 3e-13
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = -3

Query: 399 RNSPTCRKLDRVLDVVSE*QANVVQQPFLDS-----EILHTFKSMRTLKSPGPDGYTSEF 235
           ++   CR   ++         ++   PF DS     E+ +  K+MR   +PGPDG ++ F
Sbjct: 42  KSDENCRDQYQIWSAELNHVQSIEDDPFTDSTPDMKEVHNIIKNMRNNAAPGPDGLSAGF 101

Query: 234 F 232
           +
Sbjct: 102 Y 102


>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
          Length = 671

 Score = 65.1 bits (157), Expect(2) = 4e-13
 Identities = 27/64 (42%), Positives = 43/64 (67%)
 Frame = -1

Query: 218 SVTGKDVTRAIQHFFSATHLPHMINSTAVTRIPKINSPTSMKDFRPLACCNVNYKGIAKL 39
           ++ G +   A Q +F    +P  +N+T +T IPK+  PT++ D+RP+ACCNV YK I+K+
Sbjct: 444 AIIGPEFVIAFQSYFLHGFMPRGVNATTLTLIPKVEGPTTLTDYRPIACCNVIYKVISKI 503

Query: 38  FASR 27
            A+R
Sbjct: 504 LANR 507



 Score = 34.3 bits (77), Expect(2) = 4e-13
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = -3

Query: 306 EILHTFKSMRTLKSPGPDGYTSEFF 232
           EI HT  SM   KS GPDG+T EFF
Sbjct: 415 EIKHTLFSMPKNKSSGPDGFTPEFF 439