BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011288
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29343.3| unnamed protein product [Vitis vinifera]              450   e-129
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   442   e-126
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   434   e-124
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   437   e-120
ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|2...   409   e-117

>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  450 bits (1158), Expect(2) = e-129
 Identities = 221/346 (63%), Positives = 266/346 (76%), Gaps = 20/346 (5%)
 Frame = +2

Query: 5    RKKNSMHGDRGSCIQAAFQFARRYIALKVMYFGQRFYGFASEAQMDPTIESELFKALVET 184
            RKK       G+ ++     ++RY+ALKVMYFG RFYGFASEA MDPT+ESE+FKAL +T
Sbjct: 79   RKKKLKGKIPGTNMRTMNHISKRYVALKVMYFGPRFYGFASEAHMDPTVESEIFKALEKT 138

Query: 185  RLVFGDKKSWQYSRCGRTDKGVSSIGQVVALLLRSCHKVKGG---STGQLITED------ 337
             L  GDKK  QYSRCGRTDKGVSS+GQV+AL LRS  K  G    ++ +++ E+      
Sbjct: 139  WLAVGDKKELQYSRCGRTDKGVSSVGQVIALFLRSNLKEIGAREENSKEVVPEEQYEERR 198

Query: 338  -----------LCEGELDYVRILNKALPKDIRVMGWCPVPVDFSARFSCRSREYKYFFWK 484
                         EGE+DY+R+LN+ LPKDIRVMGWCPVP+ F ARFSC SREYKYFFW+
Sbjct: 199  EVKDEGGGDSLASEGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWR 258

Query: 485  ANLNIMAMDSASKKFVGEHDFRNFCKMDAANVHSFRRRITLFEICPFGERFQDDELWSIR 664
             NLNI+AM+SA KKFVGEHDFRNFCKMDA NVH++RR I  FEI P   R+  ++LW+I+
Sbjct: 259  GNLNILAMESAGKKFVGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIK 318

Query: 665  IKGSAFLWHQVRCMVAVLFMIGEGVESPDVLDALLDVDKISRKPQYIMAPEIPLVLQSCE 844
            IKGSAFLWHQVRCMVAVLFMIG+G+ESPDV+DALLD ++ SRKPQY MAPEIPLVL+SCE
Sbjct: 319  IKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCE 378

Query: 845  FDGLKFKCTEDARQALQLHFEKECQSRKLQAAIFHEALRSCSLSVN 982
            F+GLKF C+ DA QAL++H E EC++ +LQAAIFHEAL SC  S N
Sbjct: 379  FEGLKFICSSDAGQALRMHLENECRTYQLQAAIFHEALLSCLPSAN 424



 Score = 38.5 bits (88), Expect(2) = e-129
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 1068 DSRSSYTVKKKAAMHIPLMSRATEPSYEER 1157
            +S ++ T+KK+AA HI LMSR TEPSYEER
Sbjct: 430  NSLNNGTIKKEAA-HIDLMSRPTEPSYEER 458


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  442 bits (1137), Expect(2) = e-126
 Identities = 208/303 (68%), Positives = 250/303 (82%), Gaps = 2/303 (0%)
 Frame = +2

Query: 65  ARRYIALKVMYFGQRFYGFASEAQMDPTIESELFKALVETRLVFGDKKSWQYSRCGRTDK 244
           +RRY+ALKVMYFG+RFYGFASEAQM+PT+ESELFKA  +TRL+ G+KK  QYSRCGRTDK
Sbjct: 80  SRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDK 139

Query: 245 GVSSIGQVVALLLRSCHKVKGGSTGQ--LITEDLCEGELDYVRILNKALPKDIRVMGWCP 418
           GVSS+GQV+AL LRS  K+   + G   ++ ++  EGE+DYVR+LN+ LP DIR+MGWCP
Sbjct: 140 GVSSVGQVIALFLRSNLKISETNNGNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCP 199

Query: 419 VPVDFSARFSCRSREYKYFFWKANLNIMAMDSASKKFVGEHDFRNFCKMDAANVHSFRRR 598
            PVDF ARFSC SREYKYFFWK NLNI AM+SA  K VGEHDFRNFCKMDAANVH++RRR
Sbjct: 200 APVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRRR 259

Query: 599 ITLFEICPFGERFQDDELWSIRIKGSAFLWHQVRCMVAVLFMIGEGVESPDVLDALLDVD 778
           I LFEI P   R+ D++LW I+I+GSAFLWHQVRCMV VLFM+G+G+ESP+V+D LLD  
Sbjct: 260 IKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDTA 319

Query: 779 KISRKPQYIMAPEIPLVLQSCEFDGLKFKCTEDARQALQLHFEKECQSRKLQAAIFHEAL 958
           +I RKPQY MA E+PLVLQSCEFD +KF C+ +A +AL +H   ECQ  +LQAAIFHEAL
Sbjct: 320 RILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEAL 379

Query: 959 RSC 967
            +C
Sbjct: 380 LNC 382



 Score = 39.3 bits (90), Expect(2) = e-126
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +3

Query: 1065 DDSRSSYTVKKKAAMHIPLMSRATEPSYEER 1157
            D S   +   KK   H+PLMSR TEPSYEER
Sbjct: 388  DQSLLHFQGSKKKVSHVPLMSRPTEPSYEER 418


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  434 bits (1117), Expect(2) = e-124
 Identities = 205/303 (67%), Positives = 248/303 (81%), Gaps = 2/303 (0%)
 Frame = +2

Query: 65  ARRYIALKVMYFGQRFYGFASEAQMDPTIESELFKALVETRLVFGDKKSWQYSRCGRTDK 244
           ++RY+ALKV YFG+RFYGFASEAQM+PT+ESELFKA  +TRL+ GDKK  QYSRCGRTDK
Sbjct: 80  SKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDK 139

Query: 245 GVSSIGQVVALLLRSCHKVKGGSTGQ--LITEDLCEGELDYVRILNKALPKDIRVMGWCP 418
           GVSS+GQV+AL LRS  K+   + G   ++ ++  EGE+DYV +LN+ LP DIR+MGWCP
Sbjct: 140 GVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGWCP 199

Query: 419 VPVDFSARFSCRSREYKYFFWKANLNIMAMDSASKKFVGEHDFRNFCKMDAANVHSFRRR 598
            PVDF ARFSC SREYKYFFWK NLNI A++ A  K VGEHDFRNFCKMDAANVH++RR 
Sbjct: 200 APVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRRC 259

Query: 599 ITLFEICPFGERFQDDELWSIRIKGSAFLWHQVRCMVAVLFMIGEGVESPDVLDALLDVD 778
           ITLFEI     R+ D++LW I+I+GSAFLWHQVRCMVAVLFM+G+G+ESP+V+D LLD  
Sbjct: 260 ITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTS 319

Query: 779 KISRKPQYIMAPEIPLVLQSCEFDGLKFKCTEDARQALQLHFEKECQSRKLQAAIFHEAL 958
           +I RKPQY MA E+PLVLQSCEFD +KF C+ DA +AL++H   ECQ  +LQAAIFHEAL
Sbjct: 320 RILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEAL 379

Query: 959 RSC 967
            +C
Sbjct: 380 LNC 382



 Score = 39.3 bits (90), Expect(2) = e-124
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +3

Query: 1065 DDSRSSYTVKKKAAMHIPLMSRATEPSYEER 1157
            D S   +   KK   H+PLMSR TEPSYEER
Sbjct: 388  DQSLLPFQGSKKKVSHVPLMSRPTEPSYEER 418


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 438

 Score =  437 bits (1123), Expect = e-120
 Identities = 212/325 (65%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
 Frame = +2

Query: 8    KKNSMHGDRGSCIQAAFQFARRYIALKVMYFGQRFYGFASEAQMDPTIESELFKALVETR 187
            KK ++  + G          +RY+ALKVMYFGQRFYGF+SE QMDPT+ESE+FKAL  TR
Sbjct: 81   KKKTIEKNSGHATTIMNHHLKRYVALKVMYFGQRFYGFSSEGQMDPTVESEIFKALERTR 140

Query: 188  LVFGDKKSWQYSRCGRTDKGVSSIGQVVALLLRSCHKVK-----GGSTGQLITEDLCEGE 352
            L+ GDKK  QYSRCGRTDKGVS++GQV+ALLLRS  KVK     G   G+  ++   EGE
Sbjct: 141  LLIGDKKEIQYSRCGRTDKGVSAVGQVIALLLRS--KVKDIDEIGKVFGETASQKHSEGE 198

Query: 353  LDYVRILNKALPKDIRVMGWCPVPVDFSARFSCRSREYKYFFWKANLNIMAMDSASKKFV 532
            +DYVR+LN+ LP DIR++GWCPVP DFSARFSC SREYKYFF   NLN++AM+SA KKF+
Sbjct: 199  IDYVRVLNRVLPNDIRIIGWCPVPNDFSARFSCLSREYKYFFRGDNLNLLAMESAGKKFI 258

Query: 533  GEHDFRNFCKMDAANVHSFRRRITLFEICPFGERFQDDELWSIRIKGSAFLWHQVRCMVA 712
            GEHDFRNFCKMDA NVH++RR IT FEI P  ER++ ++L++I+I+GSAFLWHQVRCMVA
Sbjct: 259  GEHDFRNFCKMDAMNVHNYRRNITSFEISPCHERYEGNQLFAIKIRGSAFLWHQVRCMVA 318

Query: 713  VLFMIGEGVESPDVLDALLDVDKISRKPQYIMAPEIPLVLQSCEFDGLKFKCTEDARQAL 892
            VLFMIG+G+ESPDV+D LLD  +  RKPQY MAPEIPLVL SC+F+GL+F C+ DA +AL
Sbjct: 319  VLFMIGQGLESPDVIDVLLDTVRTPRKPQYPMAPEIPLVLHSCDFEGLQFTCSTDAGKAL 378

Query: 893  QLHFEKECQSRKLQAAIFHEALRSC 967
            + H E EC+  +LQAAIFHEA+ SC
Sbjct: 379  RTHLENECRLYQLQAAIFHEAIFSC 403


>ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|222843877|gb|EEE81424.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  409 bits (1050), Expect(2) = e-117
 Identities = 205/324 (63%), Positives = 244/324 (75%), Gaps = 25/324 (7%)
 Frame = +2

Query: 68   RRYIALKVMYFGQRFYGFASEAQMDPTIESELFKALVETRLVFGDKKSWQYSRCGRTDKG 247
            RRY+ALKVMYFGQRFYGF+ EAQMDPT+ESE+FKAL  TRL+ GD+K  QYSRCGRTDKG
Sbjct: 92   RRYVALKVMYFGQRFYGFSLEAQMDPTVESEIFKALETTRLLIGDRKEIQYSRCGRTDKG 151

Query: 248  VSSIGQVVALLLRSCHK---VKGGSTGQLITE--DLCEGELDYVRILNKALPKDIRVMGW 412
            VS++GQV+AL LRS  K        +G+ + E  D   GE+DYVR+LN  LPKDIR++GW
Sbjct: 152  VSAVGQVIALYLRSKLKDIDAHNKHSGETVPEEQDGQPGEIDYVRVLNGVLPKDIRIVGW 211

Query: 413  CPVPVDFSARFSCRSREYKYFFWKANLNIMAMDSASKKFVGEHDFRNFCKMDAANVHSFR 592
            CPVP DFSARFSC SREYKYFFW  NLN++ M++A KK +GEHDFRNFCKMDA  VH++R
Sbjct: 212  CPVPSDFSARFSCLSREYKYFFWNDNLNLLVMETAGKKLIGEHDFRNFCKMDAVKVHNYR 271

Query: 593  RRITLFEICP--------------------FGERFQDDELWSIRIKGSAFLWHQVRCMVA 712
            R +  FEI P                       RF+  +L++I+IKGSAFLWHQVRCMVA
Sbjct: 272  RNVMSFEISPCDMSHSSGMGSVKWMITKPSIRTRFEGHQLYAIKIKGSAFLWHQVRCMVA 331

Query: 713  VLFMIGEGVESPDVLDALLDVDKISRKPQYIMAPEIPLVLQSCEFDGLKFKCTEDARQAL 892
            VLFMIG+G+ESP+V+DALLD  +  RKPQY+MAPEIPLVL SCEF+GLKF C+ DA QAL
Sbjct: 332  VLFMIGQGLESPEVIDALLDT-RTLRKPQYLMAPEIPLVLLSCEFEGLKFSCSSDAGQAL 390

Query: 893  QLHFEKECQSRKLQAAIFHEALRS 964
             +H E EC+   LQAAIF EAL S
Sbjct: 391  HVHLENECRLYHLQAAIFQEALLS 414



 Score = 40.8 bits (94), Expect(2) = e-117
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +3

Query: 1077 SSYTVKKKAAMHIPLMSRATEPSYEER 1157
            SS  V +K A H+PLMSR TEPSYEER
Sbjct: 428  SSNGVTRKKASHVPLMSRETEPSYEER 454