BLASTX nr result

ID: Angelica22_contig00011223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011223
         (1786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   350   5e-94
ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycin...   345   2e-92
ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cy...   339   1e-90
gb|AFK42884.1| unknown [Lotus japonicus]                              337   6e-90
ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2...   328   3e-87

>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
            [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
            protein product [Vitis vinifera]
          Length = 292

 Score =  350 bits (899), Expect = 5e-94
 Identities = 196/328 (59%), Positives = 220/328 (67%), Gaps = 4/328 (1%)
 Frame = +2

Query: 506  AKISDSKSEFK--MQDDLVDMFSTL--NPMAKEFFPSSYSSDRFRDQFGAGXXXXXXXXX 673
            +K SDSKSEF   MQ  +VDM S L  NP+AKEFFPSSYS D                  
Sbjct: 18   SKNSDSKSEFGAGMQSMIVDMLSNLKLNPLAKEFFPSSYSHDHL---------------- 61

Query: 674  XXXXXXXXXXRDQFGAGTFRNLGNGGQPNDRRRRNNLNQGKKRMSGKAFKAQREDSIXXX 853
                               ++  N   PN+RRRRNN NQG++R+SG+AF+AQREDSI   
Sbjct: 62   -------------IPTDFSKDSPNDAYPNNRRRRNNYNQGRRRLSGRAFRAQREDSIRRT 108

Query: 854  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVTEERLAALFSSYGQVVDCRIC 1033
                                                 +VTEERLAALFSS GQVVDCR+C
Sbjct: 109  VYVSDIDQ-----------------------------HVTEERLAALFSSCGQVVDCRVC 139

Query: 1034 GDPHSRLRFAFVEFGDEYSARAALILSGTLLGFSPIKVLPSKTAILPVNPTFLPKSEDER 1213
            GDPHS LRFAFVEF DE+ ARAAL L GT+LG+ P++VLPSKTAILPVNPTFLP+SEDER
Sbjct: 140  GDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDER 199

Query: 1214 EMCARTVYCTNIDKKVSQADVKIFFETRCGEVSRLRLLGDQVHSTRISFVEFVMAESAIL 1393
            EMCARTVYCTNIDKKVSQA+VK FFE  CGEVSRLRLLGD VHSTRI+FVEF MAESAI+
Sbjct: 200  EMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIV 259

Query: 1394 ALNCCGQVLGSQPVRVSPSKTPVRPRVP 1477
            ALNC G VLG+QP+RVSPSKTPVRPRVP
Sbjct: 260  ALNCSGLVLGTQPIRVSPSKTPVRPRVP 287


>ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
            gi|255639113|gb|ACU19856.1| unknown [Glycine max]
          Length = 296

 Score =  345 bits (885), Expect = 2e-92
 Identities = 194/333 (58%), Positives = 222/333 (66%), Gaps = 4/333 (1%)
 Frame = +2

Query: 503  DAKISDSK----SEFKMQDDLVDMFSTLNPMAKEFFPSSYSSDRFRDQFGAGXXXXXXXX 670
            DA   DSK    SEF +Q  LVDMF+ LNP+AKEFFPSSYS +      G          
Sbjct: 10   DANKMDSKPKAESEFSVQK-LVDMFTKLNPLAKEFFPSSYSPNHDHGFQGFNQLSPT--- 65

Query: 671  XXXXXXXXXXXRDQFGAGTFRNLGNGGQPNDRRRRNNLNQGKKRMSGKAFKAQREDSIXX 850
                         QF   T +   N    N RRRRN+ NQG++R+SG++ KAQREDSI  
Sbjct: 66   -------------QFLVST-KPSANENFLNSRRRRNSFNQGRRRVSGRSLKAQREDSIRR 111

Query: 851  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVTEERLAALFSSYGQVVDCRI 1030
                                                  +VTEERLAALFSS GQV+DCRI
Sbjct: 112  TVYVSEIDQ-----------------------------HVTEERLAALFSSCGQVIDCRI 142

Query: 1031 CGDPHSRLRFAFVEFGDEYSARAALILSGTLLGFSPIKVLPSKTAILPVNPTFLPKSEDE 1210
            CGDPHS LRFAFVEF DEY AR AL L GT+LG+ P++VLPSKTAILPVNPTFLP+S+DE
Sbjct: 143  CGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDE 202

Query: 1211 REMCARTVYCTNIDKKVSQADVKIFFETRCGEVSRLRLLGDQVHSTRISFVEFVMAESAI 1390
            REMCART+YCTNIDKKVSQA+VK FFE+ CGEV RLRLLGDQVHSTRI+FVEF MAESAI
Sbjct: 203  REMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESAI 262

Query: 1391 LALNCCGQVLGSQPVRVSPSKTPVRPRVPNPGT 1489
            +ALNC G +LG+QP+RVSPSKTPVRPRVP P +
Sbjct: 263  IALNCSGMLLGTQPIRVSPSKTPVRPRVPRPAS 295


>ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
            nuclear-like [Glycine max]
          Length = 296

 Score =  339 bits (870), Expect = 1e-90
 Identities = 191/333 (57%), Positives = 221/333 (66%), Gaps = 4/333 (1%)
 Frame = +2

Query: 503  DAKISDSK----SEFKMQDDLVDMFSTLNPMAKEFFPSSYSSDRFRDQFGAGXXXXXXXX 670
            DA   DSK    SEF +Q  LVDMF+ LNP+AKEFFPSSYS +      G          
Sbjct: 10   DANKMDSKPKAESEFSVQK-LVDMFTKLNPLAKEFFPSSYSPNHDNRFQGFNQLSPT--- 65

Query: 671  XXXXXXXXXXXRDQFGAGTFRNLGNGGQPNDRRRRNNLNQGKKRMSGKAFKAQREDSIXX 850
                          F   T +   +   PN+RRRRN+ NQG++++SG++ KAQREDSI  
Sbjct: 66   -------------HFLVST-KPSADENFPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRR 111

Query: 851  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVTEERLAALFSSYGQVVDCRI 1030
                                                  +VTEERLAALFSS GQV+DCRI
Sbjct: 112  TVYVSEIDQ-----------------------------HVTEERLAALFSSCGQVIDCRI 142

Query: 1031 CGDPHSRLRFAFVEFGDEYSARAALILSGTLLGFSPIKVLPSKTAILPVNPTFLPKSEDE 1210
            CGDPHS LRFAFVEF DEY AR AL L GT+LG+ P++VLPSKTAILPVNPTFLP+S+DE
Sbjct: 143  CGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDE 202

Query: 1211 REMCARTVYCTNIDKKVSQADVKIFFETRCGEVSRLRLLGDQVHSTRISFVEFVMAESAI 1390
            REMCARTVYCTNIDKKVSQA+VK FFE+ CGEV RLRLLGD VHSTRI+FVEF MAESAI
Sbjct: 203  REMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIAFVEFAMAESAI 262

Query: 1391 LALNCCGQVLGSQPVRVSPSKTPVRPRVPNPGT 1489
            +ALNC G +LG+QP+RVSPSKTPVRPRV  P +
Sbjct: 263  IALNCSGMLLGTQPIRVSPSKTPVRPRVTRPAS 295


>gb|AFK42884.1| unknown [Lotus japonicus]
          Length = 313

 Score =  337 bits (864), Expect = 6e-90
 Identities = 184/332 (55%), Positives = 219/332 (65%), Gaps = 9/332 (2%)
 Frame = +2

Query: 527  SEFKMQDDLVDMFSTLNPMAKEFFPSSYSSDRFRDQFGAGXXXXXXXXXXXXXXXXXXXR 706
            SEF MQ  LVD+F+ LNP+A+EF PSSY++   RD    G                    
Sbjct: 31   SEFNMQK-LVDIFTKLNPLAEEFIPSSYAAAAHRDHLHQGF------------------- 70

Query: 707  DQFGAGTFRNLGNGGQP---------NDRRRRNNLNQGKKRMSGKAFKAQREDSIXXXXX 859
            +Q+    F    N  +P         N+RRRRNN NQG +R +G+  KAQREDS+     
Sbjct: 71   NQWSPNPFLVNNNNNKPLADDQYPNANNRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVY 130

Query: 860  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVTEERLAALFSSYGQVVDCRICGD 1039
                                               +VTEERLAALF++ G V+DCRICGD
Sbjct: 131  VSDIDQ-----------------------------HVTEERLAALFTTCGSVIDCRICGD 161

Query: 1040 PHSRLRFAFVEFGDEYSARAALILSGTLLGFSPIKVLPSKTAILPVNPTFLPKSEDEREM 1219
            PHS LRFAFVEF DEY ARAAL LSGT+LG+ P++VLPSKTAILPVNPTFLP+S+DEREM
Sbjct: 162  PHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREM 221

Query: 1220 CARTVYCTNIDKKVSQADVKIFFETRCGEVSRLRLLGDQVHSTRISFVEFVMAESAILAL 1399
            C+RTVYCTNIDKKVSQA+VK FFE  CGEV+R+RLLGD VHSTRI+FVEF +AESAI+AL
Sbjct: 222  CSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAESAIIAL 281

Query: 1400 NCCGQVLGSQPVRVSPSKTPVRPRVPNPGTQY 1495
            +C G +LG+QPVRVSPSKTPVRPRVP P T +
Sbjct: 282  SCSGMLLGTQPVRVSPSKTPVRPRVPRPTTAH 313


>ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  328 bits (841), Expect = 3e-87
 Identities = 182/321 (56%), Positives = 212/321 (66%)
 Frame = +2

Query: 521  SKSEFKMQDDLVDMFSTLNPMAKEFFPSSYSSDRFRDQFGAGXXXXXXXXXXXXXXXXXX 700
            S+SEF +Q  LVDMF+ LNP+AKEFFPSSYS +   +                       
Sbjct: 39   SESEFTVQK-LVDMFTKLNPLAKEFFPSSYSKNNPNELHFNNF----------------- 80

Query: 701  XRDQFGAGTFRNLGNGGQPNDRRRRNNLNQGKKRMSGKAFKAQREDSIXXXXXXXXXXXX 880
                  A   +   N   P  +R+RNN NQG+++++G+A++AQ+EDSI            
Sbjct: 81   ------AVPVKQSANDNFP--KRKRNNFNQGRRKLNGRAYRAQQEDSIRRTVYVSDIDQ- 131

Query: 881  XXXXXXXXXXXXXXXXXXXXXXXXXXXXNVTEERLAALFSSYGQVVDCRICGDPHSRLRF 1060
                                        +VTEERLA LFS  GQVVDCR+CGDPHS LRF
Sbjct: 132  ----------------------------HVTEERLAGLFSGCGQVVDCRVCGDPHSVLRF 163

Query: 1061 AFVEFGDEYSARAALILSGTLLGFSPIKVLPSKTAILPVNPTFLPKSEDEREMCARTVYC 1240
            AFVEF DE  ARAAL L GT+LG+ P++VLPSKTAILPVNPTFLP+SEDEREMC RTVYC
Sbjct: 164  AFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYC 223

Query: 1241 TNIDKKVSQADVKIFFETRCGEVSRLRLLGDQVHSTRISFVEFVMAESAILALNCCGQVL 1420
            TNIDKKVSQ +VK FFE+ CGEV+RLRLLGDQVHSTRI+FVEF MAESAI+ALNC G  L
Sbjct: 224  TNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIVALNCSGMAL 283

Query: 1421 GSQPVRVSPSKTPVRPRVPNP 1483
            GSQPVRVSPSKTPVRPRV  P
Sbjct: 284  GSQPVRVSPSKTPVRPRVTRP 304


Top